Evidence map›Paper›PMID 38664337›Full record

ArticleAMB Express2024

Molecular characterization of plasma virome of hepatocellular carcinoma (HCC) patients.

Niamat Ullah Khan, Asma Sadiq, Jadoon Khan, Nosheen Basharat, Zulfiqar Ul Hassan, Ijaz Ali, Tawaf Ali Shah, Mohammed Bourhia, Yousef A Bin Jardan, Gezahign Fentahun Wondmie

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 6 countries.

Niamat Ullah KhanMolecular Virology Laboratory, Department of Biosciences, COMSATS University, Islamabad, Pakistan.
Asma SadiqDepartment of Microbiology, University of Jhang, Punjab, Pakistan.
Jadoon KhanMolecular Virology Laboratory, Department of Biosciences, COMSATS University, Islamabad, Pakistan. jadoonkhan@bs.qau.edu.pk.
Nosheen BasharatDepartment of Microbiology, University of Jhang, Punjab, Pakistan.
Zulfiqar Ul HassanDepartment of Allied Health Sciences, Iqra University, Chak Shahzad Campus, Islamabad, Pakistan.
Ijaz AliMolecular Virology Laboratory, Department of Biosciences, COMSATS University, Islamabad, Pakistan.
Tawaf Ali ShahCollege of Agriculture Engineering and Food Science, Shandong University of Technology, Zibo, 255000, China.
Mohammed BourhiaLaboratory of Biotechnology and Natural Resources Valorization, Faculty of Sciences, Ibn Zohr University, Agadir, 80060, Morocco. m.bourhia@uiz.ac.ma.
Yousef A Bin JardanDepartment of Pharmaceutics, College of Pharmacy, King Saud University, P.O. Box 11451, Riyadh, Saudi Arabia.
Gezahign Fentahun WondmieDepartment of Biology, Bahir Dar University, P.O.Box 79, Bahir Dar, Ethiopia. resercherfent@gmail.com.
COMSATS University Islamabad · PKBahir Dar University · ETGulf University for Science & Technology · KWIqra University · PKKing Saud University · SAShandong University of Technology · CNUniversité Ibn Zohr · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatocellular carcinoma (HCC) stands as the most common cancer type, arising from various causes, and responsible for a substantial number of cancer-related fatalities. Recent advancements in viral metagenomics have empowered scientists to delve into the intricate diversity of the virosphere, viral evolution, interactions between viruses and their hosts, and the identification of viral causes behind disease outbreaks, the development of specific symptoms, and their potential role in altering the host's physiology. The present study had the objective of "Molecular Characterization of HBV, HCV, anelloviruses, CMV, SENV-D, SENV-H, HEV, and HPV viruses among individuals suffering from HCC." A total of 381 HCC patients contributed 10 cc of blood each for this study. The research encompassed the assessment of tumor markers, followed by molecular characterization of HBV, HCV, Anelloviruses (TTV, TTMV, and TTMDV), SENV-H and SENV-D viruses, HEV, CMV, and HPV, as well as histopathological examinations. The outcomes of this study revealed that majority of the HCC patients 72.4% (276/381) were male as compared to females. HCV infection, at 76.4% (291 out of 381), exhibited a significant association (p < 0.05) with HCC. Most patients displayed singular lesions in the liver, with Child Pugh Score Type B being the predominant finding in 45.2% of cases. Plasma virome analysis indicated the prevalence of TTMDV (75%), followed by TTMV (70%) and TTV (42.1%) among anelloviruses in HCC patients. Similarly, SENV-H (52%) was followed by SENV-D (20%), with co-infections at 15%. The presence of CMV and HEV among the HCC patients was recorded 5% each however 3.5% of the patients showed the presence of HPV. In conclusion, this study underscores that HCC patients serve as reservoirs for various pathogenic and non-pathogenic viruses, potentially contributing to the development, progression, and severity of the disease.

Indexed as

AnellovirusesHepatocellular carcinomaMetagenomicsPathogenesisViral etiologies

Identifiers

PMID38664337
PMCPMC11045709
OpenAlexW4395447555

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.