Evidence map›Paper›PMID 38662792›Full record

ArticlePLoS biology2024

Umbravirus-like RNA viruses are capable of independent systemic plant infection in the absence of encoded movement proteins.

Xiaobao Ying, Sayanta Bera, Jinyuan Liu, Roberto Toscano-Morales, Chanyong Jang, Stephen Yang, Jovia Ho, Anne E Simon

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
13.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  15. Viruses on the move.Nature reviews. Microbiology · 2024
    Article
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  18. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xiaobao YingDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America.
Sayanta BeraDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America.
Jinyuan LiuDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America.
Roberto Toscano-MoralesDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America.
Chanyong JangDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America.
Stephen YangSilvec Biologics, Inc., Gaithersburg, Maryland, United States of America.
Jovia HoSilvec Biologics, Inc., Gaithersburg, Maryland, United States of America.
Anne E SimonDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0001-6121-0704
University of Maryland, College Park · USGenVec · US

Funding

National Science Foundation EAGER 1912025National Science Foundation MCB-1818229United States Department of Agriculture 308291-00001
6 · The paper itself

Abstract

The signature feature of all plant viruses is the encoding of movement proteins (MPs) that supports the movement of the viral genome into adjacent cells and through the vascular system. The recent discovery of umbravirus-like viruses (ULVs), some of which only encode replication-associated proteins, suggested that they, as with umbraviruses that lack encoded capsid proteins (CPs) and silencing suppressors, would require association with a helper virus to complete an infection cycle. We examined the infection properties of 2 ULVs: citrus yellow vein associated virus 1 (CY1), which only encodes replication proteins, and closely related CY2 from hemp, which encodes an additional protein (ORF5CY2) that was assumed to be an MP. We report that both CY1 and CY2 can independently infect the model plant Nicotiana benthamiana in a phloem-limited fashion when delivered by agroinfiltration. Unlike encoded MPs, ORF5CY2 was dispensable for infection of CY2, but was associated with faster symptom development. Examination of ORF5CY2 revealed features more similar to luteoviruses/poleroviruses/sobemovirus CPs than to 30K class MPs, which all share a similar single jelly-roll domain. In addition, only CY2-infected plants contained virus-like particles (VLPs) associated with CY2 RNA and ORF5CY2. CY1 RNA and a defective (D)-RNA that arises during infection interacted with host protein phloem protein 2 (PP2) in vitro and in vivo, and formed a high molecular weight complex with sap proteins in vitro that was partially resistant to RNase treatment. When CY1 was used as a virus-induced gene silencing (VIGS) vector to target PP2 transcripts, CY1 accumulation was reduced in systemic leaves, supporting the usage of PP2 for systemic movement. ULVs are therefore the first plant viruses encoding replication and CPs but no MPs, and whose systemic movement relies on a host MP. This explains the lack of discernable helper viruses in many ULV-infected plants and evokes comparisons with the initial viruses transferred into plants that must have similarly required host proteins for movement.

Indexed as

NicotianaPlant DiseasesPlant Viral Movement ProteinsCapsid ProteinsGenome, ViralPhloemPlant VirusesRNA, ViralRNA VirusesCapsid ProteinsPlant Viral Movement ProteinsRNA, Viral

Identifiers

PMID38662792
PMCPMC11081511
OpenAlexW4395481173

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.