Evidence map›Paper›PMID 38662664›Full record

ArticlePloS one2024

Genetic variant rs1205 is associated with COVID-19 outcomes: The Strong Heart Study and Strong Heart Family Study.

Lyle G Best, Esther Erdei, Karin Haack, Jack W Kent, Kimberly M Malloy, Deborah E Newman, Marcia O'Leary, Rae A O'Leary, Quan Sun, Ana Navas-Acien and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Observational
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Lyle G BestEpidemiology Division, Missouri Breaks Industries Research, Inc. Eagle Butte, SD, United States of America.ORCID 0000-0002-7813-0724
Esther ErdeiPharmaceutical Sciences, University of New Mexico-Albuquerque, Albuquerque, New Mexico, United States of America.ORCID 0000-0002-7563-0774
Karin HaackTexas Biomedical Research Institute, Population Health Program, San Antonio, TX, United States of America.
Jack W KentTexas Biomedical Research Institute, Population Health Program, San Antonio, TX, United States of America.ORCID 0000-0002-0758-7639
Kimberly M MalloyDepartment of Biostatistics and Epidemiology, Center for American Indian Health Research, Hudson College of Public Health, University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States of America.
Deborah E NewmanTexas Biomedical Research Institute, Population Health Program, San Antonio, TX, United States of America.ORCID 0000-0003-4025-6601
Marcia O'LearyEpidemiology Division, Missouri Breaks Industries Research, Inc. Eagle Butte, SD, United States of America.
Rae A O'LearyEpidemiology Division, Missouri Breaks Industries Research, Inc. Eagle Butte, SD, United States of America.
Quan SunDepartment of Biostatistics, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.ORCID 0000-0001-8324-2803
Ana Navas-AcienDepartment of Environmental Health Science, Mailman School of Public Health, Columbia University, New York, NY, United States of America.
Nora FranceschiniDepartment of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.
Shelley A ColeTexas Biomedical Research Institute, Population Health Program, San Antonio, TX, United States of America.
Texas Biomedical Research Institute · USMissouri Breaks Industries Research (United States) · USUniversity of North Carolina at Chapel Hill · USColumbia University · USUniversity of New Mexico · USUniversity of North Dakota · USUniversity of Oklahoma Health Sciences Center · US

Funding

The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Hazel B Nichols · 2001 to 2026
$36.3M
Research Experience and Training Coordination CoreP42ES033719 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Ana Navas-Acien · 2022 to 2026
$11.9M
STRONG HEART STUDY (SHS)-MISSOURI BREAKS INDUSTRIES RESEARCH, INC.- FIELD CENTER (FC) TASK AREA B (B.1 AND B.3)75N92019D00029 · NHLBI · MISSOURI BREAKS RESEARCH, INC. · PI FRETTS, AMANDA MAE · 2019 to 2025
$7.5M
Leveraging ancestry to map kidney lociR01MD012765 · NIMHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FRANCESCHINI, NORA · 2017 to 2021
$3.6M
Genetics of kidney disease in diverse populationsR01DK117445 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FRANCESCHINI, NORA · 2018 to 2022
$2.7M
Arsenic Exposure, Genetic Determinants and Diabetes Risk in a Family StudyR01ES021367 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI NAVAS-ACIEN, ANA, VAIDYA, DHANANJAY MADHUKAR · 2012 to 2015
$2.4M
CRST COVID-19 - Wayakta HeR21ES033119 · NIEHS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI ERDEI, ESTHER · 2021 to 2022
$376k
NHLBI NIH HHS 75N92019D00029NIDDK NIH HHS R01 DK117445NIEHS NIH HHS P30 ES010126NIEHS NIH HHS P42 ES033719NIEHS NIH HHS R01 ES021367NIEHS NIH HHS R21 ES033119NIH HHS P51 OD011133NIMHD NIH HHS R01 MD012765
6 · The paper itself

Abstract

backgroundAlthough COVID-19 infection has been associated with a number of clinical and environmental risk factors, host genetic variation has also been associated with the incidence and morbidity of infection. The CRP gene codes for a critical component of the innate immune system and CRP variants have been reported associated with infectious disease and vaccination outcomes. We investigated possible associations between COVID-19 outcome and a limited number of candidate gene variants including rs1205. METHODOLOGY/PRINCIPAL

findingsThe Strong Heart and Strong Heart Family studies have accumulated detailed genetic, cardiovascular risk and event data in geographically dispersed American Indian communities since 1988. Genotypic data and 91 COVID-19 adjudicated deaths or hospitalizations from 2/1/20 through 3/1/23 were identified among 3,780 participants in two subsets. Among 21 candidate variants including genes in the interferon response pathway, APOE, TMPRSS2, TLR3, the HLA complex and the ABO blood group, only rs1205, a 3' untranslated region variant in the CRP gene, showed nominally significant association in T-dominant model analyses (odds ratio 1.859, 95%CI 1.001-3.453, p = 0.049) after adjustment for age, sex, center, body mass index, and a history of cardiovascular disease. Within the younger subset, association with the rs1205 T-Dom genotype was stronger, both in the same adjusted logistic model and in the SOLAR analysis also adjusting for other genetic relatedness.

conclusionA T-dominant genotype of rs1205 in the CRP gene is associated with COVID-19 death or hospitalization, even after adjustment for relevant clinical factors and potential participant relatedness. Additional study of other populations and genetic variants of this gene are warranted.

Indexed as

COVID-19SARS-CoV-2AdultAgedC-Reactive ProteinFemaleGenetic Predisposition to DiseaseGenetic VariationGenotypeHospitalizationHumansMaleMiddle AgedPolymorphism, Single NucleotideRisk FactorsC-Reactive Protein

Identifiers

PMID38662664
PMCPMC11045144
OpenAlexW4395467412

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.