Evidence map›Paper›PMID 38659982›Full record

ArticleFrontiers in microbiology2024

Ammonia-oxidizing archaea adapted better to the dark, alkaline oligotrophic karst cave than their bacterial counterparts.

Qing Li, Xiaoyu Cheng, Xiaoyan Liu, Pengfei Gao, Hongmei Wang, Chuntian Su, Qibo Huang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Qing Li *School of Environmental Studies, China University of Geosciences, Wuhan, China.
Xiaoyu Cheng *State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.
Xiaoyan LiuSchool of Environmental Studies, China University of Geosciences, Wuhan, China.
Pengfei GaoSchool of Environmental Studies, China University of Geosciences, Wuhan, China.
Hongmei WangSchool of Environmental Studies, China University of Geosciences, Wuhan, China.
Chuntian SuInstitute of Karst Geology, CAGS/Key Laboratory of Karst Dynamics, MNR & GZAR, Guilin, China.
Qibo HuangInstitute of Karst Geology, CAGS/Key Laboratory of Karst Dynamics, MNR & GZAR, Guilin, China.
China University of Geosciences · CNChina University of Geosciences (Beijing) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subsurface karst caves provide unique opportunities to study the deep biosphere, shedding light on microbial contribution to elemental cycling. Although ammonia oxidation driven by both ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) is well explored in soil and marine environments, our understanding in the subsurface biosphere still remained limited to date. To address this gap, weathered rock and sediment samples were collected from the Xincuntun Cave in Guilin City, an alkaline karst cave, and subjected to high-throughput sequencing and quantification of bacterial and archaeal

Indexed as

ammonia-oxidizing communitykarst caveniche breadthnitrificationsubsurface biosphere

Identifiers

PMID38659982
PMCPMC11041041
OpenAlexW4394691889

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.