Evidence map›Paper›PMID 38658779›Full record

ArticleEuropean journal of human genetics : EJHG2024

Discovery of recessive effect of human polymerase δ proofreading deficiency through mutational analysis of POLD1-mutated normal and cancer cells.

Maria A Andrianova, Vladimir B Seplyarskiy, Mariona Terradas, Ana Beatriz Sánchez-Heras, Pilar Mur, José Luis Soto, Gemma Aiza, Emma Borràs, Fyodor A Kondrashov, Alexey S Kondrashov and 2 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. A sibling study of variation in parental mutation rates.bioRxiv : the preprint server for biology · 2026
    Article
  3. What sets the mutation rate of a cell type in an animal species?bioRxiv : the preprint server for biology · 2025
    Article
  4. Review
  5. Genetic predisposition to polyposis syndromes.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  6. Review
  7. Review
  8. Review
  9. Hitting the heights with CiteScore.European journal of human genetics : EJHG · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 4 countries.

Maria A Andrianova *Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Spain.
Vladimir B Seplyarskiy *Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Mariona TerradasHereditary Cancer Program, Catalan Institute of Oncology, Oncobell Program, IDIBELL, Hospitalet de Llobregat, Barcelona, Spain.ORCID 0000-0001-7813-1172
Ana Beatriz Sánchez-HerasFoundation for the Promotion of Health and Biomedical Research of Valencia Region (FISABIO), Elche Health Department, Elche, Spain.ORCID 0000-0003-1742-5374
Pilar MurHereditary Cancer Program, Catalan Institute of Oncology, Oncobell Program, IDIBELL, Hospitalet de Llobregat, Barcelona, Spain.
José Luis SotoFoundation for the Promotion of Health and Biomedical Research of Valencia Region (FISABIO), Elche Health Department, Elche, Spain.ORCID 0000-0003-0234-9188
Gemma AizaHereditary Cancer Program, Catalan Institute of Oncology, Oncobell Program, IDIBELL, Hospitalet de Llobregat, Barcelona, Spain.
Emma BorràsMolecular Genetics Unit, Consorci Sanitari de Terrassa, Terrassa, Spain.ORCID 0000-0002-8237-6380
Fyodor A KondrashovInstitute of Science and Technology Austria, Klosterneuburg, Austria.
Alexey S KondrashovDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA.
Georgii A BazykinDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Laura ValleHereditary Cancer Program, Catalan Institute of Oncology, Oncobell Program, IDIBELL, Hospitalet de Llobregat, Barcelona, Spain. lvalle@idibell.cat.ORCID 0000-0003-0371-0844
Institut d'Investigació Biomédica de Bellvitge · ESBrigham and Women's Hospital · USFundación para el Fomento de la Investigación Sanitaria y Biomédica de la Comunitat Valenciana · ESConsorci Sanitari de Terrassa · ESInstitut Català d'Oncologia · ESInstitute for Research in Biomedicine · ESOkinawa Institute of Science and Technology Graduate University · JPUniversity of Michigan · US

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) I5127-BDeutsche Forschungsgemeinschaft (German Research Foundation) 429960716EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) ERC Consolidator (771209)Government of Catalonia | Departament de Salut, Generalitat de Catalunya AGAUR 2017SGR1282; CERCA ProgramMinistry of Economy and Competitiveness | Agencia Estatal de Investigación (Spanish Agencia Estatal de Investigación) PID2020-112595RB-I00Ministry of Economy and Competitiveness | Instituto de Salud Carlos III (Institute of Health Carlos III) ISCIII-AES-2017 PI17/01082
6 · The paper itself

Abstract

Constitutional heterozygous pathogenic variants in the exonuclease domain of POLE and POLD1, which affect the proofreading activity of the corresponding polymerases, cause a cancer predisposition syndrome characterized by increased risk of gastrointestinal polyposis, colorectal cancer, endometrial cancer and other tumor types. The generally accepted explanation for the connection between the disruption of the proofreading activity of polymerases epsilon and delta and cancer development is through an increase in the somatic mutation rate. Here we studied an extended family with multiple members heterozygous for the pathogenic POLD1 variant c.1421T>C p.(Leu474Pro), which segregates with the polyposis and cancer phenotypes. Through the analysis of mutational patterns of patient-derived fibroblasts colonies and de novo mutations obtained by parent-offspring comparisons, we concluded that heterozygous POLD1 L474P just subtly increases the somatic and germline mutation burden. In contrast, tumors developed in individuals with a heterozygous mutation in the exonuclease domain of POLD1, including L474P, have an extremely high mutation rate (>100 mut/Mb) associated with signature SBS10d. We solved this contradiction through the observation that tumorigenesis involves somatic inactivation of the wildtype POLD1 allele. These results imply that exonuclease deficiency of polymerase delta has a recessive effect on mutation rate.

Indexed as

DNA Polymerase IIIAdultFemaleGenes, RecessiveGerm-Line MutationHeterozygoteHumansMaleMutationNeoplasmsPedigreeDNA Polymerase IIIPOLD1 protein, human

Identifiers

PMID38658779
PMCPMC11219999
OpenAlexW4395113733

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.