Evidence map›Paper›PMID 38658621›Full record

ArticleNature structural & molecular biology2024

Alternative splicing of CARM1 regulated by LincGET-guided paraspeckles biases the first cell fate in mammalian early embryos.

Jiaqiang Wang, Yiwei Zhang, Jiaze Gao, Guihai Feng, Chao Liu, Xueke Li, Pengcheng Li, Zhonghua Liu, Falong Lu, Leyun Wang and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Subcellularly Resolved 3D Translatome in Mouse Oocytes and Early Embryos.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Paraspeckle Component 1: a multifunctional RNA binding protein.American journal of cancer research · 2025
    Review
  12. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Jiaqiang WangCollege of Life Science, Northeast Agricultural University, Harbin, China. wangjiaqiang@neau.edu.cn.ORCID http://orcid.org/0000-0002-1758-3316
Yiwei ZhangCollege of Life Science, Northeast Agricultural University, Harbin, China.ORCID http://orcid.org/0000-0002-1797-7235
Jiaze GaoCollege of Life Science, Northeast Agricultural University, Harbin, China.
Guihai FengState Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0002-8726-1734
Chao LiuState Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.
Xueke LiCollege of Life Science, Northeast Agricultural University, Harbin, China.
Pengcheng LiCollege of Life Science, Northeast Agricultural University, Harbin, China.
Zhonghua LiuCollege of Life Science, Northeast Agricultural University, Harbin, China.
Falong LuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0002-8321-4818
Leyun WangState Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China. wangleyun0828@hotmail.com.ORCID http://orcid.org/0000-0003-4448-0141
Wei LiState Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China. liwei@ioz.ac.cn.ORCID http://orcid.org/0000-0001-7864-404X
Qi ZhouState Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China. qzhou@ioz.ac.cn.ORCID http://orcid.org/0000-0002-6549-9362
Yusheng LiuCollege of Life Science, Northeast Forestry University, Harbin, China. liuys1126@foxmail.com.ORCID http://orcid.org/0000-0003-2380-0011
Northeast Agricultural University · CNChinese Academy of Sciences · CNCells Therapy (Poland) · PLInstitute of Zoology · CNNortheast Forestry University · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The heterogeneity of CARM1 controls first cell fate bias during early mouse development. However, how this heterogeneity is established is unknown. Here, we show that Carm1 mRNA is of a variety of specific exon-skipping splicing (ESS) isoforms in mouse two-cell to four-cell embryos that contribute to CARM1 heterogeneity. Disruption of paraspeckles promotes the ESS of Carm1 precursor mRNAs (pre-mRNAs). LincGET, but not Neat1, is required for paraspeckle assembly and inhibits the ESS of Carm1 pre-mRNAs in mouse two-cell to four-cell embryos. We further find that LincGET recruits paraspeckles to the Carm1 gene locus through HNRNPU. Interestingly, PCBP1 binds the Carm1 pre-mRNAs and promotes its ESS in the absence of LincGET. Finally, we find that the ESS seen in mouse two-cell to four-cell embryos decreases CARM1 protein levels and leads to trophectoderm fate bias. Our findings demonstrate that alternative splicing of CARM1 has an important role in first cell fate determination.

Indexed as

Alternative SplicingEmbryo, MammalianProtein-Arginine N-MethyltransferasesRNA, Long NoncodingAnimalsEmbryonic DevelopmentExonsGene Expression Regulation, DevelopmentalHeterogeneous-Nuclear RibonucleoproteinsMiceRNA-Binding ProteinsRNA, MessengerRNA Precursorscoactivator-associated arginine methyltransferase 1Heterogeneous-Nuclear RibonucleoproteinsNEAT1 long non-coding RNA, mouseProtein-Arginine N-MethyltransferasesRNA-Binding ProteinsRNA, Long NoncodingRNA, MessengerRNA Precursors

Identifiers

PMID38658621
PMCPMC11402786
OpenAlexW4395074775

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.