Evidence map›Paper›PMID 38658525›Full record

ArticleNature communications2024

A giant virus infecting the amoeboflagellate Naegleria.

Patrick Arthofer, Florian Panhölzl, Vincent Delafont, Alban Hay, Siegfried Reipert, Norbert Cyran, Stefanie Wienkoop, Anouk Willemsen, Ines Sifaoui, Iñigo Arberas-Jiménez and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Patrick ArthoferUniversity of Vienna, Centre for Microbiology and Environmental Systems Science, Division of Microbial Ecology, Vienna, Austria.ORCID http://orcid.org/0000-0001-6712-1649
Florian PanhölzlUniversity of Vienna, Centre for Microbiology and Environmental Systems Science, Division of Microbial Ecology, Vienna, Austria.
Vincent DelafontEcologie et Biologie des Interactions Laboratory (EBI), Microorganisms, hosts & environments team, Université de Poitiers, UMR CNRS, Poitiers, France.ORCID http://orcid.org/0000-0003-1111-2916
Alban HayEcologie et Biologie des Interactions Laboratory (EBI), Microorganisms, hosts & environments team, Université de Poitiers, UMR CNRS, Poitiers, France.ORCID http://orcid.org/0009-0002-8768-7513
Siegfried ReipertUniversity of Vienna, Research Support Facilities UBB, Vienna, Austria.
Norbert CyranUniversity of Vienna, Research Support Facilities UBB, Vienna, Austria.
Stefanie WienkoopUniversity of Vienna, Department of Functional and Evolutionary Ecology, Division of Molecular Systems Biology, Vienna, Austria.
Anouk WillemsenUniversity of Vienna, Centre for Microbiology and Environmental Systems Science, Division of Microbial Ecology, Vienna, Austria.ORCID http://orcid.org/0000-0002-8511-3244
Ines SifaouiInstituto Universitario de Enfermedades Tropicales y Salud Pública de Canarias, and Departamento de Obstetricia y Ginecología, Pediatría, Medicina Preventiva y Salud Pública, Toxicología, Medicina Legal y Forense y Parasitología, Universidad de La Laguna, Tenerife, Islas Canarias, Spain.
Iñigo Arberas-JiménezInstituto Universitario de Enfermedades Tropicales y Salud Pública de Canarias, and Departamento de Obstetricia y Ginecología, Pediatría, Medicina Preventiva y Salud Pública, Toxicología, Medicina Legal y Forense y Parasitología, Universidad de La Laguna, Tenerife, Islas Canarias, Spain.
Frederik SchulzDOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, USA.ORCID http://orcid.org/0000-0002-4932-4677
Jacob Lorenzo-MoralesInstituto Universitario de Enfermedades Tropicales y Salud Pública de Canarias, and Departamento de Obstetricia y Ginecología, Pediatría, Medicina Preventiva y Salud Pública, Toxicología, Medicina Legal y Forense y Parasitología, Universidad de La Laguna, Tenerife, Islas Canarias, Spain.
Matthias HornUniversity of Vienna, Centre for Microbiology and Environmental Systems Science, Division of Microbial Ecology, Vienna, Austria. matthias.horn@univie.ac.at.ORCID http://orcid.org/0000-0002-8309-5855
University of Vienna · ATUniversidad de La Laguna · ESCentre National de la Recherche Scientifique · FRLawrence Berkeley National Laboratory · US

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P37198-BAustrian Science Fund FWF DOC 69EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101039843EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 Marie Skłodowska-Curie Actions (H2020 Excellent Science - Marie Skłodowska-Curie Actions) 891572
6 · The paper itself

Abstract

Giant viruses (Nucleocytoviricota) are significant lethality agents of various eukaryotic hosts. Although metagenomics indicates their ubiquitous distribution, available giant virus isolates are restricted to a very small number of protist and algal hosts. Here we report on the first viral isolate that replicates in the amoeboflagellate Naegleria. This genus comprises the notorious human pathogen Naegleria fowleri, the causative agent of the rare but fatal primary amoebic meningoencephalitis. We have elucidated the structure and infection cycle of this giant virus, Catovirus naegleriensis (a.k.a. Naegleriavirus, NiV), and show its unique adaptations to its Naegleria host using fluorescence in situ hybridization, electron microscopy, genomics, and proteomics. Naegleriavirus is only the fourth isolate of the highly diverse subfamily Klosneuvirinae, and like its relatives the NiV genome contains a large number of translation genes, but lacks transfer RNAs (tRNAs). NiV has acquired genes from its Naegleria host, which code for heat shock proteins and apoptosis inhibiting factors, presumably for host interactions. Notably, NiV infection was lethal to all Naegleria species tested, including the human pathogen N. fowleri. This study expands our experimental framework for investigating giant viruses and may help to better understand the basic biology of the human pathogen N. fowleri.

Indexed as

Genome, ViralGiant VirusesNaegleriaHumansNaegleria fowleriPhylogeny

Identifiers

PMID38658525
PMCPMC11043551
OpenAlexW4395110023

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.