Evidence map›Paper›PMID 38658407›Full record

ArticleAntonie van Leeuwenhoek2024

Novel aerobic anoxygenic phototrophic bacterium Jannaschia pagri sp. nov., isolated from seawater around a fish farm.

Koyo Kuwata, Yuki Sato-Takabe, Ryosuke Nakai, Yuya Sugimura, Nozomi Tazato, Tadao Kunihiro, Sho Morohoshi, Mitsunori Iwataki, Koji Hamasaki, Takuhei Shiozaki

Abstract read
PubMed Publisher
In one paragraph

Article in Antonie van Leeuwenhoek, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Koyo KuwataGraduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Bunkyo-Ku, Tokyo, 113-8657, Japan.
Yuki Sato-TakabeAtmosphere and Ocean Research Institute, The University of Tokyo, Kashiwanoha 5-1-5, Kashiwa, Chiba, 277-8564, Japan. yukitakabe@isc.senshu-u.ac.jp.
Ryosuke NakaiBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 2-17-2-1 Tsukisamu-Higashi, Toyohira-Ku, Sapporo, 062-8517, Japan.
Yuya SugimuraTechnical Department, TechnoSuruga Laboratory Co., Ltd, 388-1 Nagasaki, Shimizu-Ku, Shizuoka, 424-0065, Japan.
Nozomi TazatoTechnical Department, TechnoSuruga Laboratory Co., Ltd, 388-1 Nagasaki, Shimizu-Ku, Shizuoka, 424-0065, Japan.
Tadao KunihiroTechnical Department, TechnoSuruga Laboratory Co., Ltd, 388-1 Nagasaki, Shimizu-Ku, Shizuoka, 424-0065, Japan.
Sho MorohoshiTechnical Department, TechnoSuruga Laboratory Co., Ltd, 388-1 Nagasaki, Shimizu-Ku, Shizuoka, 424-0065, Japan.
Mitsunori IwatakiGraduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Bunkyo-Ku, Tokyo, 113-8657, Japan.
Koji HamasakiAtmosphere and Ocean Research Institute, The University of Tokyo, Kashiwanoha 5-1-5, Kashiwa, Chiba, 277-8564, Japan.
Takuhei ShiozakiAtmosphere and Ocean Research Institute, The University of Tokyo, Kashiwanoha 5-1-5, Kashiwa, Chiba, 277-8564, Japan.
The University of Tokyo · JPOkayama Prefecture · JPShimizu (Japan) · JPNational Institute of Advanced Industrial Science and Technology · JP

Funding

JSPS KAKENHI JP19H04263MEXT Grants-in-Aid for Young Scientists 80635839
6 · The paper itself

Abstract

The genus Jannaschia is one of the representatives of aerobic anoxygenic phototrophic (AAP) bacteria, which is a strictly aerobic bacterium, producing a photosynthetic pigment bacteriochlorophyll (BChl) a. However, a part of the genus Jannaschia members have not been confirmed the photosynthetic ability. The partly presence of the ability in the genus Jannaschia could suggest the complexity of evolutionary history for anoxygenic photosynthesis in the genus, which is expected as gene loss and/or horizontal gene transfer. Here a novel AAP bacterium designated as strain AI_62

Indexed as

PhylogenySeawaterAerobiosisAnimalsAquacultureBacterial Typing TechniquesBacteriochlorophyll ADNA, BacterialJapanPhotosynthesisRNA, Ribosomal, 16SBacteriochlorophyll ADNA, BacterialRNA, Ribosomal, 16SAerobic anoxygenic phototrophic bacteriaBacteriochlorophyll aFish farmJannaschiaPseudomonadota

Identifiers

PMID38658407
OpenAlexW4395068683

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.