Evidence map›Paper›PMID 38658114›Full record

ArticleThe Lancet. Rheumatology2024

The Florida Scoring System for stratifying children with suspected Sjögren's disease: a cross-sectional machine learning study.

Wenjie Zeng, Akaluck Thatayatikom, Nicole Winn, Tyler C Lovelace, Indraneel Bhattacharyya, Thomas Schrepfer, Ankit Shah, Renato Gonik, Panayiotis V Benos, Seunghee Cha

Abstract read
In one paragraph

Article in The Lancet. Rheumatology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Wenjie ZengEpidemiology, University of Florida College of Public Health and Health Professions and College of Medicine, Gainesville, FL, USA.
Akaluck ThatayatikomPediatric Rheumatology, AdventHealth for Children, AdventHealth Medical Group, Orlando, FL, USA.
Nicole WinnCenter for Orphaned Autoimmune Disorders, University of Florida College of Dentistry, Gainesville, FL, USA; Oral Medicine, Oral and Maxillofacial Diagnostic Sciences, University of Florida College of Dentistry, Gainesville, FL, USA.
Tyler C LovelaceComputational & Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Indraneel BhattacharyyaCenter for Orphaned Autoimmune Disorders, University of Florida College of Dentistry, Gainesville, FL, USA; Oral Pathology, Oral and Maxillofacial Diagnostic Sciences, University of Florida College of Dentistry, Gainesville, FL, USA.
Thomas SchrepferPediatric Otolaryngology, University of Florida College of Medicine, Gainesville, FL, USA.
Ankit ShahOphthalmology, University of Florida College of Medicine, Gainesville, FL, USA.
Renato GonikPediatric Neurology, University of Florida College of Medicine, Gainesville, FL, USA.
Panayiotis V Benos *Epidemiology, University of Florida College of Public Health and Health Professions and College of Medicine, Gainesville, FL, USA.
Seunghee Cha *Center for Orphaned Autoimmune Disorders, University of Florida College of Dentistry, Gainesville, FL, USA; Oral Medicine, Oral and Maxillofacial Diagnostic Sciences, University of Florida College of Dentistry, Gainesville, FL, USA. Electronic address: scha@dental.ufl.edu.

Funding

Targeting P2 Receptors to Restore Salivary and Lacrimal Gland Function in Sjogren's SyndromeR01DE029833 · NIDCR · UNIVERSITY OF MISSOURI-COLUMBIA · PI WEISMAN, GARY ANDREW · 2021 to 2025
$3.2M
COPD SUBTYPES AND EARLY PREDICTION USING INTEGRATIVE PROBABILISTIC GRAPHICAL MODELS R01HL157879R01HL157879 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BENOS, PANAGIOTIS V, SCIURBA, FRANK · 2021 to 2024
$2.9M
Regulation and Function of Interleukin-7 in Primary Sjogrens SyndromeR01DE023838 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI YU, QING · 2014 to 2018
$2.4M
PKR sensing of mitochondrial dsRNA in childhood Sjogrens diseaseR01DE032707 · NIDCR · UNIVERSITY OF FLORIDA · PI SEUNGHEE CHA · 2023 to 2026
$2.4M
Interpretable graphical models for large multi-modal COPD data (R01HL159805)R01HL159805 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BENOS, PANAGIOTIS V, SPIRTES, PETER · 2021 to 2024
$2.0M
Mechanisms and Therapeutic Modulation of T Cell Autoimmune Responses in Sjogren's SyndromeR56DE023838 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI CHA, SEUNGHEE, YU, QING · 2020 to 2020
$532k
Cytoplasmic mitochondrial dsRNA in pediatric Sjogren's syndromeR21AR079693 · NIAMS · UNIVERSITY OF FLORIDA · PI CHA, SEUNGHEE · 2021 to 2021
$369k
Causal graphical methods for high-dimensional heterogeneous biomedical dataF31LM013966 · NLM · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LOVELACE, TYLER · 2022 to 2024
$143k
NHLBI NIH HHS R01 HL157879NHLBI NIH HHS R01 HL159805NIAMS NIH HHS R21 AR079693NIDCR NIH HHS R01 DE023838NIDCR NIH HHS R01 DE029833NIDCR NIH HHS R01 DE032707NIDCR NIH HHS R56 DE023838NLM NIH HHS F31 LM013966
6 · The paper itself

Abstract

backgroundChildhood Sjögren's disease is a rare, underdiagnosed, and poorly-understood condition. By integrating machine learning models on a paediatric cohort in the USA, we aimed to develop a novel system (the Florida Scoring System) for stratifying symptomatic paediatric patients with suspected Sjögren's disease.

methodsThis cross-sectional study was done in symptomatic patients who visited the Department of Pediatric Rheumatology at the University of Florida, FL, USA. Eligible patients were younger than 18 years or had symptom onset before 18 years of age. Patients with confirmed diagnosis of another autoimmune condition or infection with a clear aetiological microorganism were excluded. Eligible patients underwent comprehensive examinations to rule out or diagnose childhood Sjögren's disease. We used latent class analysis with clinical and laboratory variables to detect heterogeneous patient classes. Machine learning models, including random forest, gradient-boosted decision tree, partial least square discriminatory analysis, least absolute shrinkage and selection operator-penalised ordinal regression, artificial neural network, and super learner were used to predict patient classes and rank the importance of variables. Causal graph learning selected key features to build the final Florida Scoring System. The predictors for all models were the clinical and laboratory variables and the outcome was the definition of patient classes.

findingsBetween Jan 16, 2018, and April 28, 2022, we screened 448 patients for inclusion. After excluding 205 patients due to symptom onset later than 18 years of age, we recruited 243 patients into our cohort. 26 patients were excluded because of confirmed diagnosis of a disorder other than Sjögren's disease, and 217 patients were included in the final analysis. Median age at diagnosis was 15 years (IQR 11-17). 155 (72%) of 216 patients were female and 61 (28%) were male, 167 (79%) of 212 were White, and 20 (9%) of 213 were Hispanic, Latino, or Spanish. The latent class analysis identified three distinct patient classes: class I (dryness dominant with positive tests, n=27), class II (high symptoms with negative tests, n=98), and class III (low symptoms with negative tests, n=92). Machine learning models accurately predicted patient class and ranked variable importance consistently. The causal graphical model discovered key features for constructing the Florida Scoring System.

interpretationThe Florida Scoring System is a paediatrician-friendly tool that can be used to assist classification and long-term monitoring of suspected childhood Sjögren's disease. The resulting stratification has important implications for clinical management, trial design, and pathobiological research. We found a highly symptomatic patient group with negative serology and diagnostic profiles, which warrants clinical attention. We further revealed that salivary gland ultrasonography can be a non-invasive alternative to minor salivary gland biopsy in children. The Florida Scoring System requires validation in larger prospective paediatric cohorts.

fundingNational Institute of Dental and Craniofacial Research, National Institute of Arthritis, Musculoskeletal and Skin Diseases, National Heart, Lung, and Blood Institute, and Sjögren's Foundation.

Indexed as

Machine LearningSjogren's SyndromeAdolescentChildCross-Sectional StudiesFemaleFloridaHumansMaleSeverity of Illness Index

Identifiers

PMID38658114
PMCPMC11261574

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.