Evidence map›Paper›PMID 38657601›Full record

ArticleCell2024

Hematopoietic stem cell niche generation and maintenance are distinguishable by an epitranscriptomic program.

Longfei Gao, Heather Lee, Joshua H Goodman, Lei Ding

Open access · greenAbstract read
In one paragraph

Article in Cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

  1. The YTHDC1-mInternational journal of oral science · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Stem Cell Niche Concept: Search for Current Expert Consensus.International journal of molecular sciences · 2025
    Review
  10. Review
  11. Article
  12. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Longfei GaoColumbia Stem Cell Initiative, Department of Rehabilitation and Regenerative Medicine, Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Heather LeeColumbia Stem Cell Initiative, Department of Rehabilitation and Regenerative Medicine, Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Joshua H GoodmanColumbia Stem Cell Initiative, Department of Rehabilitation and Regenerative Medicine, Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA.
Lei DingColumbia Stem Cell Initiative, Department of Rehabilitation and Regenerative Medicine, Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY 10032, USA. Electronic address: ld2567@cumc.columbia.edu.
Columbia University · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
Understanding the role of stellate cells in the liver hematopoietic stem cell nicheR01HL153487 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DING, LEI · 2020 to 2024
$2.8M
Understanding and targeting bone marrow microenvironment in myelofibrosisR01HL155868 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DING, LEI · 2021 to 2024
$2.3M
Developing Next Generation Genetics for Understanding Hematopoietic Stem Cell BiologyR01GM146061 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DING, LEI, YAZAWA, MASAYUKI · 2022 to 2025
$2.0M
Regulation of hematopoietic stem cells and leukemia stem cells by thrombopoietinR01HL132074 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DING, LEI · 2016 to 2020
$2.0M
Epitranscriptomic regulation in hematopoietic stem cell niche generation and regenerationR01HL178977 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DING, LEI · 2025 to 2025
$697k
NCI NIH HHS P30 CA013696NHLBI NIH HHS R01 HL132074NHLBI NIH HHS R01 HL153487NHLBI NIH HHS R01 HL155868NHLBI NIH HHS R01 HL178977NIGMS NIH HHS R01 GM146061
6 · The paper itself

Abstract

The niche is typically considered as a pre-established structure sustaining stem cells. Therefore, the regulation of its formation remains largely unexplored. Whether distinct molecular mechanisms control the establishment versus maintenance of a stem cell niche is unknown. To address this, we compared perinatal and adult bone marrow mesenchymal stromal cells (MSCs), a key component of the hematopoietic stem cell (HSC) niche. MSCs exhibited enrichment in genes mediating m

Indexed as

Hematopoietic Stem CellsMesenchymal Stem CellsMethyltransferasesMice, Inbred C57BLStem Cell NicheAdenosineAnimalsCell DifferentiationEpigenesis, GeneticHumansKruppel-Like Transcription FactorsMiceOsteoblastsOsteogenesisRNA, MessengerTranscriptomeAdenosineKlf2 protein, mouseKruppel-Like Transcription FactorsMethyltransferasesMettl3 protein, mouseN-methyladenosineRNA, Messengerbone marrowepitranscriptomic regulationhematopoietic stem cellmesenchymal stromal cellniche generation

Identifiers

PMID38657601
PMCPMC11148849
OpenAlexW4395052742

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.