Evidence map›Paper›PMID 38657101›Full record

ArticleThe Plant cell2024

Cytochrome b5 diversity in green lineages preceded the evolution of syringyl lignin biosynthesis.

Xianhai Zhao, Yunjun Zhao, Qing-Yin Zeng, Chang-Jun Liu

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. A plant-specific cytochromeScience advances · 2025
    Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Xianhai ZhaoBiology Department, Brookhaven National Laboratory, Upton, NY 11973, USA.ORCID 0000-0002-2080-5629
Yunjun ZhaoBiology Department, Brookhaven National Laboratory, Upton, NY 11973, USA.ORCID 0000-0001-5181-589X
Qing-Yin ZengState Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry and Northeast Forestry University, Beijing 100091, China.ORCID 0000-0002-5730-3016
Chang-Jun LiuBiology Department, Brookhaven National Laboratory, Upton, NY 11973, USA.ORCID 0000-0001-6189-8756
Brookhaven National Laboratory · USChinese Academy of Forestry · CN

Funding

Brookhaven National Laboratory DE-SC0012704Center for Functional NanomaterialsOffice of Basic Energy Sciences DE-SC0012704Office of ScienceU.S. Department of EnergyU.S. DOE Office of Science Facility
6 · The paper itself

Abstract

Lignin production marked a milestone in vascular plant evolution, and the emergence of syringyl (S) lignin is lineage specific. S-lignin biosynthesis in angiosperms, mediated by ferulate 5-hydroxylase (F5H, CYP84A1), has been considered a recent evolutionary event. F5H uniquely requires the cytochrome b5 protein CB5D as an obligatory redox partner for catalysis. However, it remains unclear how CB5D functionality originated and whether it coevolved with F5H. We reveal here the ancient evolution of CB5D-type function supporting F5H-catalyzed S-lignin biosynthesis. CB5D emerged in charophyte algae, the closest relatives of land plants, and is conserved and proliferated in embryophytes, especially in angiosperms, suggesting functional diversification of the CB5 family before terrestrialization. A sequence motif containing acidic amino residues in Helix 5 of the CB5 heme-binding domain contributes to the retention of CB5D function in land plants but not in algae. Notably, CB5s in the S-lignin-producing lycophyte Selaginella lack these residues, resulting in no CB5D-type function. An independently evolved S-lignin biosynthetic F5H (CYP788A1) in Selaginella relies on NADPH-dependent cytochrome P450 reductase as sole redox partner, distinct from angiosperms. These results suggest that angiosperm F5Hs coopted the ancient CB5D, forming a modern cytochrome P450 monooxygenase system for aromatic ring meta-hydroxylation, enabling the reemergence of S-lignin biosynthesis in angiosperms.

Indexed as

Cytochromes b5LigninPlant ProteinsCharophyceaeCytochrome P-450 Enzyme SystemEmbryophytaEvolution, MolecularMagnoliopsidaPhylogenyCytochrome P-450 Enzyme SystemCytochromes b5LigninPlant Proteins

Identifiers

PMID38657101
PMCPMC11218783
OpenAlexW4395116306

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.