Evidence map›Paper›PMID 38656226›Full record

ArticleActa crystallographica. Section F, Structural biology communications2024

Structural and functional characterization of FabG4 from Mycolicibacterium smegmatis.

Xinping Ran, Prashit Parikh, Jan Abendroth, Tracy L Arakaki, Matthew C Clifton, Thomas E Edwards, Donald D Lorimer, Stephen Mayclin, Bart L Staker, Peter Myler and 1 more

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Structures of Legionella pneumophila serogroup 1 peptide deformylase bound to nickel(II) and actinonin.Acta crystallographica. Section F, Structural biology communications · 2025
    Article
  3. Structural characterization of dUTPase from Legionella pneumophila.Acta crystallographica. Section F, Structural biology communications · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Xinping RanDepartment of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA.
Prashit ParikhDepartment of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA.
Jan AbendrothSeattle Structural Genomics Center for Infectious Disease (SSGCID), 307 Westlake Avenue North, Seattle, WA 98109, USA.ORCID 0000-0002-8229-3243
Tracy L ArakakiEmerald Bio, Preston Court, Bedford, MA 01730, USA.
Matthew C CliftonSeattle Structural Genomics Center for Infectious Disease (SSGCID), 307 Westlake Avenue North, Seattle, WA 98109, USA.
Thomas E EdwardsBeryllium Discovery Corporation, 7869 Day Road West, Bainbridge Island, WA 98110, USA.ORCID 0000-0002-0474-8003
Donald D LorimerSeattle Structural Genomics Center for Infectious Disease (SSGCID), 307 Westlake Avenue North, Seattle, WA 98109, USA.ORCID 0000-0002-9638-8083
Stephen MayclinUCB Pharma, Bedford, Massachusetts, USA.
Bart L StakerSeattle Structural Genomics Center for Infectious Disease (SSGCID), 307 Westlake Avenue North, Seattle, WA 98109, USA.
Peter MylerSeattle Structural Genomics Center for Infectious Disease (SSGCID), 307 Westlake Avenue North, Seattle, WA 98109, USA.ORCID 0000-0002-0056-0513
Krystle J McLaughlinDepartment of Chemistry, Vassar College, 124 Raymond Avenue, Poughkeepsie, NY 12604, USA.ORCID 0000-0003-4105-1042
Joint Center for Structural Genomics · USVassar College · USBeryllium (United States) · USUCB Pharma (United States) · US

Funding

Centers for Research on Structural Biology of Infectious Diseases: Universal Influenza Vaccine Research75N93022C00036 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI STAKER, BART · 2022 to 2025
$21.7M
ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
NIAID NIH HHS 75N93022C00036NIAID NIH HHS HHSN272201700059CNIGMS NIH HHS R01 GM129325NIH HHS HHSN272201700059C
6 · The paper itself

Abstract

The rise in antimicrobial resistance is a global health crisis and necessitates the development of novel strategies to treat infections. For example, in 2022 tuberculosis (TB) was the second leading infectious killer after COVID-19, with multi-drug-resistant strains of TB having an ∼40% fatality rate. Targeting essential biosynthetic pathways in pathogens has proven to be successful for the development of novel antimicrobial treatments. Fatty-acid synthesis (FAS) in bacteria proceeds via the type II pathway, which is substantially different from the type I pathway utilized in animals. This makes bacterial fatty-acid biosynthesis (Fab) enzymes appealing as drug targets. FabG is an essential FASII enzyme, and some bacteria, such as Mycobacterium tuberculosis, the causative agent of TB, harbor multiple homologs. FabG4 is a conserved, high-molecular-weight FabG (HMwFabG) that was first identified in M. tuberculosis and is distinct from the canonical low-molecular-weight FabG. Here, structural and functional analyses of Mycolicibacterium smegmatis FabG4, the third HMwFabG studied to date, are reported. Crystal structures of NAD

Indexed as

Bacterial ProteinsMycobacterium smegmatisAmino Acid SequenceCrystallography, X-RayModels, MolecularRecombinant ProteinsBacterial ProteinsRecombinant ProteinsFabGHMwFabGMycobacteriumMycobacterium smegmatisMycobacterium tuberculosisMycolicibacterium smegmatisNIAIDoxidoreductasesSeattle Structural Genomics Center for Infectious Diseasestructural genomics

Identifiers

PMID38656226
PMCPMC11058512
OpenAlexW4395466612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.