Evidence map›Paper›PMID 38656038›Full record

ArticleRevista do Instituto de Medicina Tropical de Sao Paulo2024

Epidemiological and molecular surveillance of norovirus in the Brazilian Amazon: description of recombinant genotypes and improvement of evolutionary analysis.

Jonaia Novaes da Costa, Jones Anderson Monteiro Siqueira, Dielle Monteiro Teixeira, Patrícia Dos Santos Lobo, Sylvia de Fátima Dos Santos Guerra, Isadora Monteiro Souza, Bruna Trindade Moreira Cardoso, Luana Silva Soares Farias, Hugo Reis Resque, Yvone Benchimol Gabbay and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Revista do Instituto de Medicina Tropical de Sao Paulo, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Human norovirus in Brazil: an update of reports in different settings.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Jonaia Novaes da CostaInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0003-2482-6782
Jones Anderson Monteiro SiqueiraInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0002-6491-6590
Dielle Monteiro TeixeiraInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0002-1007-9328
Patrícia Dos Santos LoboInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0003-0209-6969
Sylvia de Fátima Dos Santos GuerraInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0002-5830-0810
Isadora Monteiro SouzaInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0009-0004-7772-5322
Bruna Trindade Moreira CardosoInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0002-8424-1340
Luana Silva Soares FariasInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0001-9509-4019
Hugo Reis ResqueInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0001-6435-376X
Yvone Benchimol GabbayInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0003-1242-0523
Luciana Damascena da SilvaInstituto Evandro Chagas, Seção de Virologia, Ananindeua, Pará, Brazil.ORCID http://orcid.org/0000-0002-2372-6520
Instituto Evandro Chagas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noroviruses are highly infectious, genetically diverse viruses. Global outbreaks occur frequently, making molecular surveillance important for infection monitoring. This cross-sectional descriptive study aimed to monitor cases of norovirus gastroenteritis in the Brazilian Amazon. Fecal samples were tested by immunoenzymatic assay, RT-PCR and genetic sequencing for the ORF1/ORF2 and protease regions. Bayesian inference with a molecular clock was employed to construct the phylogeny. The norovirus prevalence was 25.8%, with a higher positivity rate among children aged 0-24 months. Genogroup GII accounted for 98.1% of the sequenced samples, while GI accounted for 1.9% of them. The GII.P16/GII.4 genotype was the most prevalent, with an evolution rate of 2.87x10-3 and TMRCA estimated in 2012. This study demonstrates that norovirus is a primary causative agent of gastroenteritis and provides data on viral genetic diversity that may facilitate infection surveillance and vaccine development.

Indexed as

Caliciviridae InfectionsFecesGastroenteritisGenotypeNorovirusPhylogenyAdolescentAdultAgedBrazilChildChild, PreschoolCross-Sectional StudiesFemaleGenetic VariationHumansRNA, Viral

Identifiers

PMID38656038
PMCPMC11027490
OpenAlexW4394954705

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.