Evidence map›Paper›PMID 38654363›Full record

ArticleJournal of ovarian research2024

Unravelling driver genes as potential therapeutic targets in ovarian cancer via integrated bioinformatics approach.

Anam Beg, Rafat Parveen, Hassan Fouad, M E Yahia, Azza S Hassanein

Abstract read
In one paragraph

Article in Journal of ovarian research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Anam BegDepartment of Computer Science, Jamia Millia Islamia, New Delhi, 110025, India.
Rafat ParveenDepartment of Computer Science, Jamia Millia Islamia, New Delhi, 110025, India. rparveen@jmi.ac.in.
Hassan FouadApplied Medical Science Department, CC, King Saud University, Riyadh, 11433, Saudi Arabia.
M E YahiaAbu Dhabi Polytechnic, Institute of Applied Technology, Abu Dhabi, 111499, United Arab Emirates.
Azza S HassaneinBiomedical Engineering Department, Faculty of Engineering, Helwan University, Cairo, Egypt.

Funding

Hassan Fouad RSP2023R117
6 · The paper itself

Abstract

Target-driven cancer therapy is a notable advancement in precision oncology that has been accompanied by substantial medical accomplishments. Ovarian cancer is a highly frequent neoplasm in women and exhibits significant genomic and clinical heterogeneity. In a previous publication, we presented an extensive bioinformatics study aimed at identifying specific biomarkers associated with ovarian cancer. The findings of the network analysis indicate the presence of a cluster of nine dysregulated hub genes that exhibited significance in the underlying biological processes and contributed to the initiation of ovarian cancer. Here in this research article, we are proceeding our previous research by taking all hub genes into consideration for further analysis. GEPIA2 was used to identify patterns in the expression of critical genes. The KM plotter analysis indicated that the out of all genes 5 genes are statistically significant. The cBioPortal platform was further used to investigate the frequency of genetic mutations across the board and how they affected the survival of the patients. Maximum mutation was reported by ELAVL2. In order to discover viable therapeutic candidates after competitive inhibition of ELAVL2 with small molecular drug complex, high throughput screening and docking studies were used. Five compounds were identified. Overall, our results suggest that the ELAV-like protein 2-ZINC03830554 complex was relatively stable during the molecular dynamic simulation. The five compounds that have been found can also be further examined as potential therapeutic possibilities. The combined findings suggest that ELAVL2, together with their genetic changes, can be investigated in therapeutic interventions for precision oncology, leveraging early diagnostics and target-driven therapy.

Indexed as

Computational BiologyOvarian NeoplasmsBiomarkers, TumorELAV-Like Protein 2FemaleGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMolecular Docking SimulationMolecular Targeted TherapyMutationBiomarkers, TumorELAV-Like Protein 2DockingHub genesMD simulation therapeutic targetsOvarian cancerPrognostic relevanceRNA-binding proteins

Identifiers

PMID38654363
PMCPMC11036584

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.