Evidence map›Paper›PMID 38654237›Full record

ArticleBMC microbiology2024

Phenotypic and molecular characterization of β-lactamase-producing Klebsiella species among children discharged from hospital in Western Kenya.

Doreen Rwigi, Andrew K Nyerere, Mame M Diakhate, Kevin Kariuki, Kirkby D Tickell, Timothy Mutuma, Stephanie N Tornberg, Olusegun O Soge, Judd L Walson, Benson Singa and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 2 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 2 syntheses or guidelines pooled it, 8 citations in OpenAlex.

  1. Descriptive Epidemiology ofBioMed research international · 2025
    Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Article
  6. Article
  7. The Potential Roles of Prophages in the Pathogenicity ofAntibiotics (Basel, Switzerland) · 2025
    Article
  8. β-Lactamase and Macrolide Resistance Gene Carriage inOpen forum infectious diseases · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Doreen RwigiKenya Medical Research Institute (KEMRI), Nairobi, Kenya. doreen.rwigi@gmail.com.
Andrew K NyerereJomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
Mame M DiakhateDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Kevin KariukiKenya Medical Research Institute (KEMRI), Nairobi, Kenya.
Kirkby D TickellDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Timothy MutumaKenya Medical Research Institute (KEMRI), Nairobi, Kenya.
Stephanie N TornbergDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Olusegun O SogeDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Judd L WalsonDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Benson SingaKenya Medical Research Institute (KEMRI), Nairobi, Kenya.
Samuel KariukiKenya Medical Research Institute (KEMRI), Nairobi, Kenya.
Patricia B PavlinacDepartment of Global Health, University of Washington, Seattle, Washington, USA.
Polycarp MogeniKenya Medical Research Institute (KEMRI), Nairobi, Kenya. pkambona11@gmail.com.
University of Washington · USKenya Medical Research Institute · KEJomo Kenyatta University of Agriculture and Technology · KEJohns Hopkins University · US

Funding

Mechanisms of post-discharge morbidity and mortality in HIV-infected and HIV-exposed uninfected childrenR01HD079695 · NICHD · UNIVERSITY OF WASHINGTON · PI WALSON, JUDD L. · 2015 to 2019
$3.8M
The role of enteric pathogens and antimicrobial resistance in driving clinical and nutritional deterioration, and azithromycin's potential effect, among children discharged from hospital in KenyaR01AI150978 · NIAID · UNIVERSITY OF WASHINGTON · PI PAVLINAC, PATRICIA · 2020 to 2024
$3.7M
NIAID NIH HHS R01 AI150978NICHD NIH HHS R01 HD079695
6 · The paper itself

Abstract

backgroundThe emergence and spread of β-lactamase-producing Klebsiella spp. has been associated with a substantial healthcare burden resulting in therapeutic failures. We sought to describe the proportion of phenotypic resistance to commonly used antibiotics, characterize β-lactamase genes among isolates with antimicrobial resistance (AMR), and assess the correlates of phenotypic AMR in Klebsiella spp. isolated from stool or rectal swab samples collected from children being discharged from hospital.

methodsWe conducted a cross-sectional study involving 245 children aged 1-59 months who were being discharged from hospitals in western Kenya between June 2016 and November 2019. Whole stool or rectal swab samples were collected and Klebsiella spp. isolated by standard microbiological culture. β-lactamase genes were detected by PCR whilst phenotypic antimicrobial susceptibility was determined using the disc diffusion technique following standard microbiology protocols. Descriptive analyses were used to characterize phenotypic AMR and carriage of β-lactamase-producing genes. The modified Poisson regression models were used to assess correlates of phenotypic beta-lactam resistance.

resultsThe prevalence of β-lactamase carriage among Klebsiella spp. isolates at hospital discharge was 62.9% (154/245). Antibiotic use during hospitalization (adjusted prevalence ratio [aPR] = 4.51; 95%CI: 1.79-11.4, p < 0.001), longer duration of hospitalization (aPR = 1.42; 95%CI: 1.14-1.77, p < 0.002), and access to treated water (aPR = 1.38; 95%CI: 1.12-1.71, p < 0.003), were significant predictors of phenotypically determined β-lactamase. All the 154 β-lactamase-producing Klebsiella spp. isolates had at least one genetic marker of β-lactam/third-generation cephalosporin resistance. The most prevalent genes were bla

conclusionCarriage of β-lactamase producing Klebsiella spp. in stool is common among children discharged from hospital in western Kenya and is associated with longer duration of hospitalization, antibiotic use, and access to treated water. The findings emphasize the need for continued monitoring of antimicrobial susceptibility patterns to inform the development and implementation of appropriate treatment guidelines. In addition, we recommend measures beyond antimicrobial stewardship and infection control within hospitals, improved sanitation, and access to safe drinking water to mitigate the spread of β-lactamase-producing Klebsiella pathogens in these and similar settings.

Indexed as

Anti-Bacterial Agentsbeta-LactamasesKlebsiellaKlebsiella InfectionsMicrobial Sensitivity TestsChild, PreschoolCross-Sectional StudiesFecesFemaleHumansInfantKenyaMalePatient DischargePhenotypePrevalenceAnti-Bacterial Agentsbeta-LactamasesAntimicrobial resistanceBeta-lactamsCephalosporinsExtended Spectrum Beta lactamasesKlebsiella spp

Identifiers

PMID38654237
PMCPMC11040804
OpenAlexW4395049227

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.