Evidence map›Paper›PMID 38654158›Full record

ArticleBMC plant biology2024

Systematic characterization of Gossypium GLN family genes reveals a potential function of GhGLN1.1a regulates nitrogen use efficiency in cotton.

Xiaotong Li, Yunqi Gu, Mirezhatijiang Kayoumu, Noor Muhammad, Xiangru Wang, Huiping Gui, Tong Luo, Qianqian Wang, Xieraili Wumaierjiang, Sijia Ruan and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Xiaotong Li *Zhengzhou Research Base, National Key Laboratory of Cotton Bio-Breeding and Integrated Utilization, School of Agricultural Sciences, Zhengzhou University, Zhengzhou, Henan, China.
Yunqi Gu *National Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Mirezhatijiang KayoumuNational Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Noor MuhammadZhengzhou Research Base, National Key Laboratory of Cotton Bio-Breeding and Integrated Utilization, School of Agricultural Sciences, Zhengzhou University, Zhengzhou, Henan, China.
Xiangru WangNational Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Huiping GuiNational Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Tong LuoWestern Agricultural Research Center of Chinese Academy of Agricultural Sciences, Changji, 831100, Xinjiang, China.
Qianqian WangWestern Agricultural Research Center of Chinese Academy of Agricultural Sciences, Changji, 831100, Xinjiang, China.
Xieraili WumaierjiangNational Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Sijia RuanNational Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Asif IqbalDepartment of Agriculture, Hazara University, Khyber Pakhtunkhwa, Mansehra, 21120, Pakistan.
Xiling ZhangNational Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS, Anyang, 455000, Henan, China.
Meizhen SongZhengzhou Research Base, National Key Laboratory of Cotton Bio-Breeding and Integrated Utilization, School of Agricultural Sciences, Zhengzhou University, Zhengzhou, Henan, China. songmeizhencaas@163.com.
Qiang DongWestern Agricultural Research Center of Chinese Academy of Agricultural Sciences, Changji, 831100, Xinjiang, China. dongqiang@caas.cn.
Cotton Research Institute · CNXinjiang Academy of Agricultural Sciences · CNZhengzhou University · CNHazara University · PK

Funding

National Engineering Research Center of Cotton Biology Breeding and Industrial Technology /Institute of Cotton Research of CAAS No. NERC010109National Key Laboratory of Cotton Bio-breeding and Integrated Utilization No. CB2023C07
6 · The paper itself

Abstract

The enzyme glutamine synthetase (GLN) is mainly responsible for the assimilation and reassimilation of nitrogen (N) in higher plants. Although the GLN gene has been identified in various plants, there is little information about the GLN family in cotton (Gossypium spp.). To elucidate the roles of GLN genes in cotton, we systematically investigated and characterized the GLN gene family across four cotton species (G. raimondii, G. arboreum, G. hirsutum, and G. barbadense). Our analysis encompassed analysis of members, gene structure, cis-element, intragenomic duplication, and exploration of collinear relationships. Gene duplication analysis indicated that segmental duplication was the primary driving force for the expansion of the GhGLN gene family. Transcriptomic and quantitative real-time reverse-transcription PCR (qRT-PCR) analyses indicated that the GhGLN1.1a gene is responsive to N induction treatment and several abiotic stresses. The results of virus-induced gene silencing revealed that the accumulation and N use efficiency (NUE) of cotton were affected by the inactivation of GhGLN1.1a. This study comprehensively analyzed the GhGLN genes in Gossypium spp., and provides a new perspective on the functional roles of GhGLN1.1a in regulating NUE in cotton.

Indexed as

Gene Expression Regulation, PlantGlutamate-Ammonia LigaseGossypiumNitrogenPlant ProteinsGene DuplicationGenes, PlantMultigene FamilyPhylogenyGlutamate-Ammonia LigaseNitrogenPlant ProteinsGene expressionGene familyGlutamine synthetaseGossypiumNitrogen use efficiency

Identifiers

PMID38654158
PMCPMC11036627
OpenAlexW4395045937

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.