Evidence map›Paper›PMID 38653995›Full record

ArticleScientific data2024

Nuclear and mitochondrial genomes of Polylopha cassiicola: the first assembly in Chlidanotinae (Tortricidae).

Fangyuan Yang, Li-Jun Cao, Jin-Cui Chen, Wei Song, Yuzhu Yu, Shu-Jun Wei

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Fangyuan YangInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.ORCID 0000-0002-8435-3326
Li-Jun CaoInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.ORCID 0000-0002-4595-0136
Jin-Cui ChenInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
Wei SongInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
Yuzhu YuGuangxi National Qinlian Forest Farm, Guangxi, China.
Shu-Jun WeiInstitute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China. shujun268@163.com.ORCID 0000-0001-7398-0968

Funding

École Nationale d'Ingénieurs de Saint-Etienne (National Engineering School of Saint-Étienne) 32272543
6 · The paper itself

Abstract

Tortricidae is one of the largest families in Lepidoptera, including subfamilies of Tortricinae, Olethreutinae, and Chlidanotinae. Here, we assembled the gap-free genome for the subfamily Chlidanotinae using Illumina, Nanopore, and Hi-C sequencing from Polylopha cassiicola, a pest of camphor trees in southern China. The nuclear genome is 302.03 Mb in size, with 36.82% of repeats and 98.4% of BUCSO completeness. The karyotype is 2n = 44 for males. We identified 15412 protein-coding genes, 1052 tRNAs, and 67 rRNAs. We also determined the mitochondrial genome of this species and annotated 13 protein-coding genes, 22 tRNAs, and one rRNA. These high-quality genomes provide valuable information for studying phylogeny, karyotypic evolution, and adaptive evolution of tortricid moths.

Indexed as

Genome, InsectGenome, MitochondrialMothsAnimalsChinaKaryotypeMalePhylogenyRNA, TransferRNA, Transfer

Identifiers

PMID38653995
PMCPMC11039721

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.