Evidence map›Paper›PMID 38653976›Full record

ArticleNature communications2024

A genomic basis of vocal rhythm in birds.

Matteo Sebastianelli, Sifiso M Lukhele, Simona Secomandi, Stacey G de Souza, Bettina Haase, Michaella Moysi, Christos Nikiforou, Alexander Hutfluss, Jacquelyn Mountcastle, Jennifer Balacco and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Long-interval neurons are selective for slower pulse rates in chorus frogs that are sympatric versus allopatric with congeneric heterospecifics.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. A genomic basis of vocal rhythm in birds.Nature communications · 2024
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 7 countries.

Matteo SebastianelliDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus. matteo.sebastianelli@imbim.uu.se.ORCID http://orcid.org/0000-0002-0858-8887
Sifiso M LukheleDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.ORCID http://orcid.org/0000-0003-0638-0641
Simona SecomandiDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.ORCID http://orcid.org/0000-0001-8597-6034
Stacey G de SouzaDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.
Bettina HaaseVertebrate Genome Lab, The Rockefeller University, New York, NY, USA.
Michaella MoysiDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.
Christos NikiforouDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus.
Alexander HutflussBehavioural Ecology, Faculty of Biology, LMU Munich (LMU), 82152, Planegg-Martinsried, Germany.
Jacquelyn MountcastleVertebrate Genome Lab, The Rockefeller University, New York, NY, USA.
Jennifer BalaccoVertebrate Genome Lab, The Rockefeller University, New York, NY, USA.
Sarah PelanWellcome Sanger Institute, Cambridge, UK.
William ChowWellcome Sanger Institute, Cambridge, UK.
Olivier FedrigoVertebrate Genome Lab, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0002-6450-7551
Colleen T DownsCentre for Functional Biodiversity, School of Life Sciences, University of KwaZulu-Natal, Pietermaritzburg, 3209, South Africa.ORCID http://orcid.org/0000-0001-8334-1510
Ara MonadjemDepartment of Biological Sciences, University of Eswatini, Kwaluseni, Eswatini.ORCID http://orcid.org/0000-0003-1906-4023
Niels J DingemanseBehavioural Ecology, Faculty of Biology, LMU Munich (LMU), 82152, Planegg-Martinsried, Germany.ORCID http://orcid.org/0000-0003-3320-0861
Erich D JarvisVertebrate Genome Lab, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0001-8931-5049
Alan BrelsfordDepartment of Evolution, Ecology and Organismal Biology, University of California Riverside, Riverside, CA, 92521, USA.
Bridgett M vonHoldtDepartment of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ, 08544, USA.ORCID http://orcid.org/0000-0001-6908-1687
Alexander N G KirschelDepartment of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia, 1678, Cyprus. kirschel@ucy.ac.cy.ORCID http://orcid.org/0000-0003-4379-7956
University of Cyprus · CYRockefeller University · USUrologische Klinik München · DEWellcome Sanger Institute · GBHoward Hughes Medical Institute · USPrinceton University · USUniversity of California, Riverside · USUniversity of Eswatini · SZUniversity of KwaZulu-Natal · ZAUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vocal rhythm plays a fundamental role in sexual selection and species recognition in birds, but little is known of its genetic basis due to the confounding effect of vocal learning in model systems. Uncovering its genetic basis could facilitate identifying genes potentially important in speciation. Here we investigate the genomic underpinnings of rhythm in vocal non-learning Pogoniulus tinkerbirds using 135 individual whole genomes distributed across a southern African hybrid zone. We find rhythm speed is associated with two genes that are also known to affect human speech, Neurexin-1 and Coenzyme Q8A. Models leveraging ancestry reveal these candidate loci also impact rhythmic stability, a trait linked with motor performance which is an indicator of quality. Character displacement in rhythmic stability suggests possible reinforcement against hybridization, supported by evidence of asymmetric assortative mating in the species producing faster, more stable rhythms. Because rhythm is omnipresent in animal communication, candidate genes identified here may shape vocal rhythm across birds and other vertebrates.

Indexed as

Vocalization, AnimalAnimalsBirdsFemaleGenomeGenomicsMaleSongbirds

Identifiers

PMID38653976
PMCPMC11039653
OpenAlexW4395031728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.