Evidence map›Paper›PMID 38653759›Full record

ArticleNature communications2024

Strong linkage between benthic oxygen uptake and bacterial tetraether lipids in deep-sea trench regions.

Wenjie Xiao, Yunping Xu, Donald E Canfield, Frank Wenzhöfer, Chuanlun Zhang, Ronnie N Glud

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Alkane degradation mechanism ofFrontiers in microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 4 countries.

Wenjie XiaoDepartment of Biology, HADAL & Nordcee, University of Southern Denmark, 5230, Odense M, Denmark. wjxiaocug@126.com.ORCID http://orcid.org/0000-0002-4734-683X
Yunping XuShanghai Frontiers Research Center of the Hadal Biosphere, College of Oceanography and Ecological Science, Shanghai Ocean University, 201306, Shanghai, China. ypxu@shou.edu.cn.ORCID http://orcid.org/0000-0001-5693-7239
Donald E CanfieldDepartment of Biology, HADAL & Nordcee, University of Southern Denmark, 5230, Odense M, Denmark.
Frank WenzhöferDepartment of Biology, HADAL & Nordcee, University of Southern Denmark, 5230, Odense M, Denmark.ORCID http://orcid.org/0000-0002-4621-0586
Chuanlun ZhangShenzhen Key Laboratory of Marine Archaea Geo-Omics, Department of Ocean Science and Engineering, Southern University of Science and Technology, 518055, Shenzhen, China.
Ronnie N GludDepartment of Biology, HADAL & Nordcee, University of Southern Denmark, 5230, Odense M, Denmark. rnglud@biology.sdu.dk.ORCID http://orcid.org/0000-0002-7069-893X
University of Southern Denmark · DKAlfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung · DEShanghai Astronomical Observatory · CNShanghai Ocean University · CN

Funding

Danmarks Grundforskningsfond (Danish National Research Foundation) DNRF145National Natural Science Foundation of China (National Science Foundation of China) 42206040National Natural Science Foundation of China (National Science Foundation of China) 42276033
6 · The paper itself

Abstract

Oxygen in marine sediments regulates many key biogeochemical processes, playing a crucial role in shaping Earth's climate and benthic ecosystems. In this context, branched glycerol dialkyl glycerol tetraethers (brGDGTs), essential biomarkers in paleoenvironmental research, exhibit an as-yet-unresolved association with sediment oxygen conditions. Here, we investigated brGDGTs in sediments from three deep-sea regions (4045 to 10,100 m water depth) dominated by three respective trench systems and integrated the results with in situ oxygen microprofile data. Our results demonstrate robust correlations between diffusive oxygen uptake (DOU) obtained from microprofiles and brGDGT methylation and isomerization degrees, indicating their primary production within sediments and their strong linkage with microbial diagenetic activity. We establish a quantitative relationship between the Isomerization and Methylation index of Branched Tetraethers (IMBT) and DOU, suggesting its potential validity across deep-sea environments. Increased brGDGT methylation and isomerization likely enhance the fitness of source organisms in deep-sea habitats. Our study positions brGDGTs as a promising tool for quantifying benthic DOU in deep-sea settings, where DOU is a key metric for assessing sedimentary organic carbon degradation and microbial activity.

Indexed as

BacteriaGeologic SedimentsOxygenEcosystemEthersLipidsMethylationSeawaterEthersLipidsOxygen

Identifiers

PMID38653759
PMCPMC11039702
OpenAlexW4395029300

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.