Evidence map›Paper›PMID 38652464›Full record

ArticleThe Journal of experimental medicine2024

A de novo dominant-negative variant is associated with OTULIN-related autoinflammatory syndrome.

Yukiko Takeda, Masahiro Ueki, Junpei Matsuhiro, Erik Walinda, Takayuki Tanaka, Masafumi Yamada, Hiroaki Fujita, Shunichiro Takezaki, Ichiro Kobayashi, Sakura Tamaki and 12 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in The Journal of experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. Monogenic disorders of the TNF signalling pathway.Nature reviews. Rheumatology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 1 country.

Yukiko TakedaDepartment of Molecular and Cellular Physiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0009-0003-8175-6765
Masahiro UekiDepartment of Pediatrics, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Sapporo, Japan.ORCID 0000-0001-7379-4874
Junpei MatsuhiroDepartment of Molecular and Cellular Physiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0009-0007-7167-7587
Erik WalindaDepartment of Molecular and Cellular Physiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0003-1882-6401
Takayuki TanakaDepartment of Pediatrics, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0002-8465-9640
Masafumi YamadaDepartment of Pediatrics, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Sapporo, Japan.ORCID 0000-0002-6347-3521
Hiroaki FujitaDepartment of Molecular and Cellular Physiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0003-1465-6425
Shunichiro TakezakiDepartment of Pediatrics, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Sapporo, Japan.ORCID 0000-0002-0425-4097
Ichiro KobayashiDepartment of Pediatrics, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Sapporo, Japan.ORCID 0000-0003-4956-4010
Sakura TamakiDepartment of Regeneration Science and Engineering, Institute for Life and Medical Sciences, Kyoto University, Kyoto, Japan.ORCID 0009-0004-6179-6329
Sanae NagataDepartment of Fundamental Cell Technology, Center for iPS Cell Research and Application, Kyoto University, Kyoto, Japan.ORCID 0009-0000-5502-0613
Noriko MiyakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.ORCID 0000-0001-5322-2983
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.ORCID 0000-0001-9846-6500
Mitsujiro OsawaDepartment of Clinical Application, Center for iPS Cell Research and Application, Kyoto University, Kyoto, Japan.ORCID 0009-0004-9893-780X
Takahiro YasumiDepartment of Pediatrics, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0003-3257-5071
Toshio HeikeDepartment of Pediatrics, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0009-0007-3155-1971
Fumiaki OhtakeInstitute for Advanced Life Sciences, Hoshi University , Tokyo, Japan.ORCID 0000-0002-8590-6172
Megumu K SaitoDepartment of Clinical Application, Center for iPS Cell Research and Application, Kyoto University, Kyoto, Japan.ORCID 0000-0001-8813-3614
Junya ToguchidaDepartment of Regeneration Science and Engineering, Institute for Life and Medical Sciences, Kyoto University, Kyoto, Japan.ORCID 0000-0002-0184-9685
Junko TakitaDepartment of Pediatrics, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0002-2452-6520
Tadashi ArigaDepartment of Pediatrics, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Sapporo, Japan.ORCID 0000-0001-5674-3020
Kazuhiro IwaiDepartment of Molecular and Cellular Physiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.ORCID 0000-0001-5620-5951
Kyoto University · JPHokkaido University · JPHoshi University · JPNational Center for Global Health and Medicine · JPSapporo Gakuin University · JPYokohama City University · JP

Funding

Japan Agency for Medical Research and Development JP23ek0109674Japanese Ministry of Health, Labour and WelfareJapan Society for the Promotion of Science 17H06174Takeda Science Foundation
6 · The paper itself

Abstract

OTULIN-related autoinflammatory syndrome (ORAS), a severe autoinflammatory disease, is caused by biallelic pathogenic variants of OTULIN, a linear ubiquitin-specific deubiquitinating enzyme. Loss of OTULIN attenuates linear ubiquitination by inhibiting the linear ubiquitin chain assembly complex (LUBAC). Here, we report a patient who harbors two rare heterozygous variants of OTULIN (p.P152L and p.R306Q). We demonstrated accumulation of linear ubiquitin chains upon TNF stimulation and augmented TNF-induced cell death in mesenchymal stem cells differentiated from patient-derived iPS cells, which confirms that the patient has ORAS. However, although the de novo p.R306Q variant exhibits attenuated deubiquitination activity without reducing the amount of OTULIN, the deubiquitination activity of the p.P152L variant inherited from the mother was equivalent to that of the wild-type. Patient-derived MSCs in which the p.P152L variant was replaced with wild-type also exhibited augmented TNF-induced cell death and accumulation of linear chains. The finding that ORAS can be caused by a dominant-negative p.R306Q variant of OTULIN furthers our understanding of disease pathogenesis.

Indexed as

UbiquitinationEndopeptidasesFemaleHereditary Autoinflammatory DiseasesHumansInduced Pluripotent Stem CellsInfant, NewbornMesenchymal Stem CellsMutationPedigreeTumor Necrosis Factor-alphaUbiquitinEndopeptidasesOTULIN protein, humanTumor Necrosis Factor-alphaUbiquitin

Identifiers

PMID38652464
PMCPMC11040501
OpenAlexW4395036336

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.