Evidence map›Paper›PMID 38652444›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2024

Metagenomic analysis of soil microbial communities associated with Poa alpigena Lindm in Haixin Mountain, Qinghai Lake.

Daoyuan Li, Hengsheng Wang, Naidong Chen, Haiyang Jiang, Naifu Chen

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Daoyuan LiCollege of Biotechnology and Pharmaceutical Engineering, West Anhui University, Lu'an City, 237012, China.
Hengsheng WangHefei Normal University, Hefei Anhui, 230601, China.
Naidong ChenCollege of Biotechnology and Pharmaceutical Engineering, West Anhui University, Lu'an City, 237012, China.
Haiyang JiangCollege of Life Sciences, Anhui Agricultural University, Hefei, 230036, China. hyjiang@ahau.edu.cn.
Naifu ChenCollege of Biotechnology and Pharmaceutical Engineering, West Anhui University, Lu'an City, 237012, China. NaifuChen2023@163.com.ORCID http://orcid.org/0009-0007-0778-9605
Institute for Sustainable Development · ETAnhui Agricultural University · CNQinghai University · CNWest Anhui University · CN

Funding

Anhui Scientific Research and Innovation Team of Quality Evaluation and Improvement of Traditional Chinese Medicine 2022AH010090Natural Science Research Project of Anhui Provincial Colleges and Universities KJ2021A0924Postdoctoral Science Foundation of West Anhui University WXBSH2021001The High-level Talent Project of West Anhui University WGKQ2021021the Provincial Level Nature Science Foundation of Anhui Education Department GXYQ2020127
6 · The paper itself

Abstract

To investigate the impact of Poa alpigena Lindm on rhizosphere and bulk soil microorganisms in Haixin Mountain, Qinghai Lake, this study employed metagenomics technology to analyze the microbial communities of the samples. Results showed that 65 phyla, 139 classes, 278 orders, 596 families, 2376 genera, and 5545 species of soil microorganisms were identified from rhizosphere and bulk soil samples. Additionally, a microbial gene library specific to Poa alpigena Lindm was established for Qinghai Lake. Through α-diversity analysis, the richness and diversity of bulk microorganisms both significantly had a higher value than that in rhizosphere soil. The indicator microorganisms of rhizosphere and bulk soil at class level were Actinobacteria and Alphaproteobacteria, respectively. KEGG pathway analysis indicated that Carotenoid biosynthesis, Starch and sucrose metabolism, Bacterial chemotaxis, MAPK signaling pathway, Terpenoid backbone biosynthesis, and vancomycin resistance were the key differential metabolic pathways of rhizosphere soil microorganisms; in contrast, in bulk soil, the key differential metabolic were Benzoate degradation, Glycolysis gluconeogenesis, Aminobenzoate degradation, ABC transporters, Glyoxylate and dicarboxylate metabolism, oxidative phosphorylation, Degradation of aromatic compounds, Methane metabolism, Pyruvate metabolism and Microbial metabolism diverse environments. Our results indicated that Poa alpigena Lindm rhizosphere soil possessed selectivity for microorganisms in Qinghai Lake Haixin Mountain, and the rhizosphere soil also provided a suitable survival environment for microorganisms.

Indexed as

BacteriaLakesMetagenomicsRhizosphereSoil MicrobiologyBiodiversityChinaMetagenomeMicrobiotaPhylogenyBulk soilMetagenomics sequencingMicrobial diversityPoa alpigena LindmRhizosphere soil

Identifiers

PMID38652444
PMCPMC11405548
OpenAlexW4395048043

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.