Evidence map›Paper›PMID 38650646›Full record

ArticlePeerJ2024

Metabolome and transcriptome integration reveals insights into petals coloration mechanism of three species in Sect.

Yadan Yan, Ye Wang, Yafeng Wen, Yu Huang, Minhuan Zhang, Jiadi Huang, Xinyu Li, Chuncheng Wang, Dangqing Xu

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 94% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yadan YanCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Ye WangCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Yafeng WenCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Yu HuangNanning University, Nanning, China.
Minhuan ZhangCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Jiadi HuangCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Xinyu LiCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Chuncheng WangCollege of Landscape Architecture, Central South University of Forestry and Technology, Changsha, China.
Dangqing XuNanning University, Nanning, China.
Central South University · CNCentral South University of Forestry and Technology · CNNanning Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Sect. Methods: We conducted an integrated analysis of metabolome and transcriptome to reveal petal coloration mechanism in three species, which have different yellow tones petals, including Results: A total of 356 flavonoid metabolites were detected, and 295 differential metabolites were screened. The contents of 74 differential metabolites showed an upward trend and 19 metabolites showed a downward trend, among which 11 metabolites were annotated to the KEGG pathway database. We speculated that 10 metabolites were closely related to the deepening of the yellowness. Transcriptome analysis indicated that there were 2,948, 14,018 and 13,366 differentially expressed genes (DEGs) between CZ

Indexed as

CamelliaFlowersGene Expression Regulation, PlantMetabolomePigmentationTranscriptomeFlavonoidsGene Expression ProfilingFlavonoidsCandidate genesFlavonoid biosynthesisFlower colorSect. Chrysantha changTranscription factors

Identifiers

PMID38650646
PMCPMC11034495
OpenAlexW4394949122

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.