Evidence map›Paper›PMID 38650267›Full record

ArticleBioresources and bioprocessing2021

Combined transcriptome and metabolome analyses reveal the potential mechanism for the inhibition of Penicillium digitatum by X33 antimicrobial oligopeptide.

Shuhua Lin, Yuanxiu Wang, Qunlin Lu, Bin Zhang, Xiaoyu Wu

Open access · diamondAbstract read
In one paragraph

Article in Bioresources and bioprocessing, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shuhua Lin *College of Bioscience and Bioengineering, Jiangxi Agriculture University, Nanchang, 330045, China.
Yuanxiu Wang *College of Bioscience and Bioengineering, Jiangxi Agriculture University, Nanchang, 330045, China.
Qunlin LuCollege of Bioscience and Bioengineering, Jiangxi Agriculture University, Nanchang, 330045, China.
Bin ZhangCollege of Bioscience and Bioengineering, Jiangxi Agriculture University, Nanchang, 330045, China. zhangbin2919@163.com.ORCID http://orcid.org/0000-0003-0525-0474
Xiaoyu WuCollege of Bioscience and Bioengineering, Jiangxi Agriculture University, Nanchang, 330045, China. xiaoyuwu@jxau.edu.cn.
Jiangxi Agricultural University · CN

Funding

jiangxi provincial department of science and technology 20171ACF60006
6 · The paper itself

Abstract

Penicillium digitatum is the primary spoilage fungus that causes green mold during postharvest in citrus. To reduce economic losses, developing more efficient and less toxic natural antimicrobial agents is urgently required. We previously found that the X33 antimicrobial oligopeptide (X33 AMOP), produced by Streptomyces lavendulae X33, exhibited a sterilization effect on P. digitatum. In this study, the effects, and physiological mechanisms of X33 AMOP as an inhibitor of P. digitatum were investigated. The transcriptional and metabolome profiling of P. digitatum exposed to X33 AMOP revealed 3648 genes and 190 metabolites that were prominently changed. The omics analyses suggested that X33 AMOP mainly inhibited P. digitatum growth by affecting cell integrity, genetic information delivery, oxidative stress tolerance, and energy metabolism. These findings provide helpful information regarding the antimicrobial mechanism of X33 AMOP against P. digitatum at the molecular level and indicate that X33 AMOP is a potential candidate to control P. digitatum.

Indexed as

Antimicrobial mechanismMetabolomicsPenicillium digitatumTranscriptomicsX33 antimicrobial oligopeptide

Identifiers

PMID38650267
PMCPMC10991954
OpenAlexW3215267185

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.