Evidence map›Paper›PMID 38646567›Full record

ArticlePlant direct2024

Pectin methylesterification state and cell wall mechanical properties contribute to neighbor proximity-induced hypocotyl growth in Arabidopsis.

Fabien Sénéchal, Sarah Robinson, Evert Van Schaik, Martine Trévisan, Prashant Saxena, Didier Reinhardt, Christian Fankhauser

Open access · goldAbstract read
In one paragraph

Article in Plant direct, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Fabien SénéchalCentre for Integrative Genomics, Faculty of Biology and Medicine, Génopode Building University of Lausanne Lausanne Switzerland.ORCID https://orcid.org/0000-0002-4145-7205
Sarah RobinsonInstitute of Plant Sciences University of Bern Bern Switzerland.ORCID https://orcid.org/0000-0001-7643-1059
Evert Van SchaikDepartment of Biology University of Fribourg Fribourg Switzerland.ORCID https://orcid.org/0009-0008-9475-0393
Martine TrévisanCentre for Integrative Genomics, Faculty of Biology and Medicine, Génopode Building University of Lausanne Lausanne Switzerland.ORCID https://orcid.org/0000-0002-6610-6954
Prashant SaxenaCentre for Integrative Genomics, Faculty of Biology and Medicine, Génopode Building University of Lausanne Lausanne Switzerland.ORCID https://orcid.org/0000-0001-5071-726X
Didier ReinhardtDepartment of Biology University of Fribourg Fribourg Switzerland.ORCID https://orcid.org/0000-0003-3495-6783
Christian FankhauserCentre for Integrative Genomics, Faculty of Biology and Medicine, Génopode Building University of Lausanne Lausanne Switzerland.ORCID https://orcid.org/0000-0003-4719-5901
University of Lausanne · CHUniversity of Fribourg · CHInstitut Charles Viollette · FRUniversity of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants growing with neighbors compete for light and consequently increase the growth of their vegetative organs to enhance access to sunlight. This response, called shade avoidance syndrome (SAS), involves photoreceptors such as phytochromes as well as phytochrome interacting factors (PIFs), which regulate the expression of growth-mediating genes. Numerous cell wall-related genes belong to the putative targets of PIFs, and the importance of cell wall modifications for enabling growth was extensively shown in developmental models such as dark-grown hypocotyl. However, the contribution of the cell wall in the growth of de-etiolated seedlings regulated by shade cues remains poorly established. Through analyses of mechanical and biochemical properties of the cell wall coupled with transcriptomic analysis of cell wall-related genes from previously published data, we provide evidence suggesting that cell wall modifications are important for neighbor proximity-induced elongation. Further analysis using loss-of-function mutants impaired in the synthesis and remodeling of the main cell wall polymers corroborated this. We focused on the

Identifiers

PMID38646567
PMCPMC11033045
OpenAlexW4394990315

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.