Evidence map›Paper›PMID 38645065›Full record

ArticlebioRxiv : the preprint server for biology2024

Stepwise Stiffening/Softening of and Cell Recovery from Reversibly Formulated Hydrogel Double Networks.

Irina Kopyeva, Ethan C Goldner, Jack W Hoye, Shiyu Yang, Mary C Regier, Kaitlyn R Vera, Ross C Bretherton, Cole A DeForest

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Irina KopyevaDepartment of Bioengineering, University of Washington, Seattle WA 98105, USA.ORCID 0000-0003-3740-6971
Ethan C GoldnerDepartment of Chemical Engineering, University of Washington, Seattle WA 98105, USA.ORCID 0009-0000-6347-2353
Jack W HoyeDepartment of Chemical Engineering, University of Washington, Seattle WA 98105, USA.ORCID 0009-0003-8251-731X
Shiyu YangDepartment of Chemical Engineering, University of Washington, Seattle WA 98105, USA.ORCID 0009-0004-9126-7786
Mary C RegierInstitute of Stem Cell & Regenerative Medicine, University of Washington, Seattle WA 98105, USA.ORCID 0000-0001-9074-6604
Kaitlyn R VeraDepartment of Chemical Engineering, University of Washington, Seattle WA 98105, USA.ORCID 0009-0001-7898-7533
Ross C BrethertonDepartment of Bioengineering, University of Washington, Seattle WA 98105, USA.ORCID 0000-0002-9567-8556
Cole A DeForestDepartment of Bioengineering, University of Washington, Seattle WA 98105, USA.ORCID 0000-0003-0337-3577

Funding

Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
Mimicking, Exploiting, and Understanding Biology's Heterogeneity in 4DR35GM138036 · NIGMS · UNIVERSITY OF WASHINGTON · PI Cole A DeForest · 2020 to 2026
$2.3M
NCI NIH HHS T32 CA080416NIGMS NIH HHS R35 GM138036
6 · The paper itself

Abstract

Biomechanical contributions of the ECM underpin cell growth and proliferation, differentiation, signal transduction, and other fate decisions. As such, biomaterials whose mechanics can be spatiotemporally altered - particularly in a reversible manner - are extremely valuable for studying these mechanobiological phenomena. Herein, we introduce a poly(ethylene glycol) (PEG)-based hydrogel model consisting of two interpenetrating step-growth networks that are independently formed via largely orthogonal bioorthogonal chemistries and sequentially degraded with distinct bacterial transpeptidases, affording reversibly tunable stiffness ranges that span healthy and diseased soft tissues (e.g., 500 Pa - 6 kPa) alongside terminal cell recovery for pooled and/or single-cell analysis in a near "biologically invisible" manner. Spatiotemporal control of gelation within the primary supporting network was achieved via mask-based and two-photon lithography; these stiffened patterned regions could be subsequently returned to the original soft state following sortase-based secondary network degradation. Using this approach, we investigated the effects of 4D-triggered network mechanical changes on human mesenchymal stem cell (hMSC) morphology and Hippo signaling, as well as Caco-2 colorectal cancer cell mechanomemory at the global transcriptome level via RNAseq. We expect this platform to be of broad utility for studying and directing mechanobiological phenomena, patterned cell fate, as well as disease resolution in softer matrices.

Indexed as

bioorthogonalhydrogelmechanomemorysortasestimuli-responsive

Identifiers

PMID38645065
PMCPMC11030224

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.