Evidence map›Paper›PMID 38643291›Full record

ArticleScientific data2024

FastMRI Prostate: A public, biparametric MRI dataset to advance machine learning for prostate cancer imaging.

Radhika Tibrewala, Tarun Dutt, Angela Tong, Luke Ginocchio, Riccardo Lattanzi, Mahesh B Keerthivasan, Steven H Baete, Sumit Chopra, Yvonne W Lui, Daniel K Sodickson and 2 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Radhika TibrewalaCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA. radhika.tibrewala@nyulangone.org.ORCID 0000-0002-3837-1144
Tarun DuttBernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.ORCID 0009-0003-7683-4271
Angela TongCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-4733-3414
Luke GinocchioBernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-0183-7246
Riccardo LattanziCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-8240-5903
Mahesh B KeerthivasanBernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.
Steven H BaeteCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.ORCID 0000-0003-3361-3789
Sumit ChopraBernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.
Yvonne W LuiCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.ORCID 0000-0002-9984-9164
Daniel K SodicksonCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.
Hersh ChandaranaCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.
Patricia M JohnsonCenter for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, New York, USA.

Funding

TR&D 4: Revealing Microstructure: Biophysical modeling and validation for discovery and clinical careP41EB017183 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Christopher M Collins · 2014 to 2026
$19.3M
Fingerprinting-Based Neuronal Fiber Identification in Brain SurgeryR01EB028774 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BAETE, STEVEN H. · 2020 to 2023
$1.9M
Learning an Optimized Variational Network for Medical Image ReconstructionR01EB024532 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI JOHNSON, PATRICIA MARGARET, KNOLL, FLORIAN · 2018 to 2021
$1.8M
NIBIB NIH HHS P41 EB017183NIBIB NIH HHS R01 EB024532NIBIB NIH HHS R01 EB028774
6 · The paper itself

Abstract

Magnetic resonance imaging (MRI) has experienced remarkable advancements in the integration of artificial intelligence (AI) for image acquisition and reconstruction. The availability of raw k-space data is crucial for training AI models in such tasks, but public MRI datasets are mostly restricted to DICOM images only. To address this limitation, the fastMRI initiative released brain and knee k-space datasets, which have since seen vigorous use. In May 2023, fastMRI was expanded to include biparametric (T2- and diffusion-weighted) prostate MRI data from a clinical population. Biparametric MRI plays a vital role in the diagnosis and management of prostate cancer. Advances in imaging methods, such as reconstructing under-sampled data from accelerated acquisitions, can improve cost-effectiveness and accessibility of prostate MRI. Raw k-space data, reconstructed images and slice, volume and exam level annotations for likelihood of prostate cancer are provided in this dataset for 47468 slices corresponding to 1560 volumes from 312 patients. This dataset facilitates AI and algorithm development for prostate image reconstruction, with the ultimate goal of enhancing prostate cancer diagnosis.

Indexed as

Magnetic Resonance ImagingProstateProstatic NeoplasmsArtificial IntelligenceHumansMachine LearningMale

Identifiers

PMID38643291
PMCPMC11032332

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.