Evidence map›Paper›PMID 38641928›Full record

ArticleJournal of cachexia, sarcopenia and muscle2024

DNA methylation of skeletal muscle function-related secretary factors identifies FGF2 as a potential biomarker for sarcopenia.

Jia-Wen Li, Zheng-Kai Shen, Yu-Shuang Lin, Zhi-Yue Wang, Mei-Lin Li, Hui-Xian Sun, Quan Wang, Can Zhao, Jin-Shui Xu, Xiang Lu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cachexia, sarcopenia and muscle, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

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  11. Epigenetics of Skeletal Muscle Atrophy.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jia-Wen LiDepartment of Geriatrics, Zhongda Hospital, School of Medicine, Southeast University, Nanjing, China.
Zheng-Kai ShenJiangsu Province Center for Disease Control and Prevention, Nanjing, China.
Yu-Shuang LinDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Zhi-Yue WangDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Mei-Lin LiDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Hui-Xian SunDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Quan WangDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Can ZhaoDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Jin-Shui XuJiangsu Province Center for Disease Control and Prevention, Nanjing, China.
Xiang LuDepartment of Geriatrics, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Wei GaoDepartment of Geriatrics, Zhongda Hospital, School of Medicine, Southeast University, Nanjing, China.ORCID 0000-0002-4770-5062
Nanjing Medical University · CNJiangsu Provincial Center for Disease Control and Prevention · CNZhongda Hospital Southeast University · CN

Funding

Jiangsu Commission of Health LKM2023004Jiangsu Commission of Health LKZ2023005Jiangsu Commission of Health LR2022004National Key Research and Development Plan of China 2020YFC2008505National Natural Science Foundation of China 81970217National Natural Science Foundation of China 81970218
6 · The paper itself

Abstract

backgroundSarcopenia is characterized by progressive loss of muscle mass and function due to aging. DNA methylation has been identified to play important roles in the dysfunction of skeletal muscle. The aim of our present study was to explore the whole blood sample-based methylation changes of skeletal muscle function-related factors in patients with sarcopenia.

methodsThe overall DNA methylation levels were analysed by using MethlTarget™ DNA Methylation Analysis platform in a discovery set consistent of 50 sarcopenic older adults (aged ≥65 years) and 50 age- and sex-matched non-sarcopenic individuals. The candidate differentially methylated regions (DMRs) were further validated by Methylation-specific PCR (MSP) in another two independent larger sets and confirmed by pyrosequencing. Receiver operating characteristic (ROC) curve analysis was used to determine the optimum cut-off levels of fibroblast growth factor 2 (FGF2)_30 methylation best predicting sarcopenia and area under the ROC curve (AUC) was measured. The correlation between candidate DMRs and the risk of sarcopenia was investigated by univariate analysis and multivariate logistic regression analysis.

resultsAmong 1149 cytosine-phosphate-guanine (CpG) sites of 27 skeletal muscle function-related secretary factors, 17 differentially methylated CpG sites and 7 differentially methylated regions (DMRs) were detected between patients with sarcopenia and control subjects in the discovery set. Further methylation-specific PCR identified that methylation of fibroblast growth factor 2 (FGF2)_30 was lower in patients with sarcopenia and the level was decreased as the severity of sarcopenia increased, which was confirmed by pyrosequencing. Correlation analysis demonstrated that the methylation level of FGF2_30 was positively correlated to ASMI (r = 0.372, P < 0.001), grip strength (r = 0.334, P < 0.001), and gait speed (r = 0.411, P < 0.001). ROC curve analysis indicated that the optimal cut-off value of FGF2_30 methylation level that predicted sarcopenia was 0.15 with a sensitivity of 84.6% and a specificity of 70.1% (AUC = 0.807, 95% CI = 0.756-0.858, P < 0.001). Multivariate logistic regression analyses showed that lower FGF2_30 methylation level (<0.15) was significantly associated with increased risk of sarcopenia even after adjustment for potential confounders including age, sex, and BMI (adjusted OR = 9.223, 95% CI: 6.614-12.861, P < 0.001).

conclusionsOur results suggest that lower FGF2_30 methylation is correlated with the risk and severity of sarcopenia in the older adults, indicating that FGF2 methylation serve as a surrogate biomarker for the screening and evaluation of sarcopenia.

Indexed as

BiomarkersDNA MethylationFibroblast Growth Factor 2Muscle, SkeletalROC CurveSarcopeniaAgedCpG IslandsFemaleHumansMaleBiomarkersFibroblast Growth Factor 2DNA methylationFGF2Older adultsSarcopenia

Identifiers

PMID38641928
PMCPMC11154778
OpenAlexW4394976274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.