Evidence map›Paper›PMID 38640119›Full record

ArticlePLoS computational biology2024

What does the mean mean? A simple test for neuroscience.

Alejandro Tlaie, Katharine Shapcott, Thijs L van der Plas, James Rowland, Robert Lees, Joshua Keeling, Adam Packer, Paul Tiesinga, Marieke L Schölvinck, Martha N Havenith

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Locally Induced Traveling Waves Generate Globally Observable Traveling Waves.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 4 countries.

Alejandro TlaieErnst Strüngmann Institute for Neuroscience, Frankfurt am Main, Germany.ORCID 0000-0002-6844-5765
Katharine ShapcottErnst Strüngmann Institute for Neuroscience, Frankfurt am Main, Germany.
Thijs L van der PlasDepartment of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, United Kingdom.
James RowlandDepartment of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, United Kingdom.
Robert LeesDepartment of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, United Kingdom.
Joshua KeelingDepartment of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, United Kingdom.
Adam PackerDepartment of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, United Kingdom.
Paul TiesingaDepartment of Neuroinformatics, Donders Institute, Radboud University, Nijmegen, The Netherlands.
Marieke L SchölvinckErnst Strüngmann Institute for Neuroscience, Frankfurt am Main, Germany.
Martha N HavenithErnst Strüngmann Institute for Neuroscience, Frankfurt am Main, Germany.
University of Oxford · GBErnst Strüngmann Institute for Neuroscience · DERadboud University Nijmegen · NL

Funding

Biotechnology and Biological Sciences Research Council BB/M011224/1Wellcome Trust
6 · The paper itself

Abstract

Trial-averaged metrics, e.g. tuning curves or population response vectors, are a ubiquitous way of characterizing neuronal activity. But how relevant are such trial-averaged responses to neuronal computation itself? Here we present a simple test to estimate whether average responses reflect aspects of neuronal activity that contribute to neuronal processing. The test probes two assumptions implicitly made whenever average metrics are treated as meaningful representations of neuronal activity: Reliability: Neuronal responses repeat consistently enough across trials that they convey a recognizable reflection of the average response to downstream regions.Behavioural relevance: If a single-trial response is more similar to the average template, it is more likely to evoke correct behavioural responses. We apply this test to two data sets: (1) Two-photon recordings in primary somatosensory cortices (S1 and S2) of mice trained to detect optogenetic stimulation in S1; and (2) Electrophysiological recordings from 71 brain areas in mice performing a contrast discrimination task. Under the highly controlled settings of Data set 1, both assumptions were largely fulfilled. In contrast, the less restrictive paradigm of Data set 2 met neither assumption. Simulations predict that the larger diversity of neuronal response preferences, rather than higher cross-trial reliability, drives the better performance of Data set 1. We conclude that when behaviour is less tightly restricted, average responses do not seem particularly relevant to neuronal computation, potentially because information is encoded more dynamically. Most importantly, we encourage researchers to apply this simple test of computational relevance whenever using trial-averaged neuronal metrics, in order to gauge how representative cross-trial averages are in a given context.

Indexed as

NeuronsNeurosciencesSomatosensory CortexAnimalsComputational BiologyComputer SimulationMiceModels, NeurologicalOptogeneticsReproducibility of Results

Identifiers

PMID38640119
PMCPMC11062559
OpenAlexW4394963693

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.