Evidence map›Paper›PMID 38637321›Full record

ArticleThe Journal of infectious diseases2024

Clinical Severity of Enteric Viruses Detected Using a Quantitative Molecular Assay Compared With Conventional Assays in the Global Enteric Multicenter Study.

Jordan Cates, Helen Powell, James Platts-Mills, Dilruba Nasrin, Sandra Panchalingam, Samba O Sow, Awa Traore, Dipika Sur, Thandavarayan Ramamurthy, Anita K M Zaidi and 15 more

Abstract readMulticenter StudyComparative Study
In one paragraph

Article in The Journal of infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Jordan CatesDivision of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.ORCID 0000-0003-4300-7416
Helen PowellCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, USA.
James Platts-MillsDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia, USA.
Dilruba NasrinCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Sandra PanchalingamCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Samba O SowCentre pour le Développement des Vaccins, Bamako, Mali.
Awa TraoreCentre pour le Développement des Vaccins, Bamako, Mali.
Dipika SurNational Institute of Cholera and Enteric Diseases, Kolkata, India.
Thandavarayan RamamurthyNational Institute of Cholera and Enteric Diseases, Kolkata, India.
Anita K M ZaidiDepartment of Paediatrics and Child Health, Aga Khan University, Karachi, Pakistan.
Furqan KabirDepartment of Paediatrics and Child Health, Aga Khan University, Karachi, Pakistan.
Abu S G FaruqueInternational Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
Dilruba AhmedInternational Centre for Diarrhoeal Disease Research, Dhaka, Bangladesh.
Robert F BreimanDepartment of Global Health, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA.
Richard OmoreCenters for Global Health Research (KEMRI-CGHR), Kenya Medical Research Institute, Kisumu, Kenya.
John Benjamin OchiengCenters for Global Health Research (KEMRI-CGHR), Kenya Medical Research Institute, Kisumu, Kenya.
M Jahangir HossainMedical Research Council (UK) Unit The Gambia at the London School of Hygiene and Tropical Medicine, Fajara, The Gambia.
Martin AntonioMedical Research Council (UK) Unit The Gambia at the London School of Hygiene and Tropical Medicine, Fajara, The Gambia.
Inácio MandomandoCentro de Investigação em Saúde da Manhiça, Maputo, Mozambique.
Delfino VubilCentro de Investigação em Saúde da Manhiça, Maputo, Mozambique.
James P NataroCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Myron M LevineCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0002-5721-5040
Umesh D ParasharDivision of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Karen L KotloffCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Jacqueline E TateDivision of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

Funding

Gates Foundation OPP1019093Intramural CDC HHS CC999999
6 · The paper itself

Abstract

backgroundQuantitative molecular assays are increasingly used for detection of enteric viruses.

methodsWe compared the clinical severity using the modified Vesikari score (mVS) of enteric viruses detected by conventional assays (enzyme immunoassays [EIAs] for rotavirus and adenovirus 40/41 and conventional polymerase chain reaction for astrovirus, sapovirus, and norovirus) and a quantitative molecular assay (TaqMan Array Card [TAC]) among children aged 0-59 months in the Global Enteric Multicenter Study. For rotavirus and adenovirus 40/41, we compared severity between EIA-positive and TAC-positive cases assigned etiologies using different cycle threshold (Ct) cutoffs.

resultsUsing conventional assays, the median mVS (interquartile range) was 10 (8-11) for rotavirus, 9 (7-11) for adenovirus 40/41, 8 (6-10) for astrovirus, sapovirus, and norovirus GII, and 7 (6-9) for norovirus GI. Compared with rotavirus EIA-positive cases, the median mVS was 2 and 3 points lower for EIA-negative/TAC-positive cases with Ct <32.6 or Ct ≥32.6 and <35, respectively (P < .001). Adenovirus 40/41 EIA-positive and EIA-negative/TAC-positive cases were similar, regardless of Ct cutoff.

conclusionsQuantitative molecular assays compared with conventional assays, such as EIA, may influence the severity of identified cases, especially for rotavirus. Cutoffs to assign etiology for quantitative assays should be considered in the design and interpretation of enteric virus studies.

Indexed as

Severity of Illness IndexChild, PreschoolFecesFemaleGastroenteritisHumansInfantInfant, NewbornMaleNorovirusRotavirusclinical severitydiagnosticspediatric diarrheaquantitative molecular assayviral gastroenteritis

Identifiers

PMID38637321
PMCPMC11486833

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.