Evidence map›Paper›PMID 38635749›Full record

ArticlePLOS global public health2024

SARS-CoV-2 co-detection with influenza and human respiratory syncytial virus in Ethiopia: Findings from the severe acute respiratory illness (SARI) and influenza-like illness (ILI) sentinel surveillance, January 01, 2021, to June 30, 2022.

Wolde Shure, Adamu Tayachew, Tsegaye Berkessa, Gizaw Teka, Mengistu Biru, Ayele Gebeyehu, Adane Woldeab, Musse Tadesse, Melaku Gonta, Admikew Agune and 17 more

Open access · goldAbstract read
In one paragraph

Article in PLOS global public health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 5 institutions in 2 countries.

Wolde ShureEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Adamu TayachewEthiopian Public Health Institute, Addis Ababa, Ethiopia.ORCID https://orcid.org/0000-0001-6338-9824
Tsegaye BerkessaEthiopian Public Health Institute, Addis Ababa, Ethiopia.ORCID https://orcid.org/0000-0003-2376-6917
Gizaw TekaEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Mengistu BiruEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Ayele GebeyehuEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Adane WoldeabEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Musse TadesseEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Melaku GontaEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Admikew AguneEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Aster HailemariamEthiopian Public Health Institute, Addis Ababa, Ethiopia.ORCID https://orcid.org/0009-0000-7326-6123
Bizuwork HaileEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Beza AddisEthiopian Public Health Institute, Addis Ababa, Ethiopia.ORCID https://orcid.org/0000-0002-3476-6210
Muluken MogesEthiopian Public Health Institute, Addis Ababa, Ethiopia.ORCID https://orcid.org/0000-0003-4572-3424
Leuel LisanworkThe Ohio State University Global One Health initiative (GOHi), Addis Ababa, Ethiopia.
Lehageru GizachewThe Ohio State University Global One Health initiative (GOHi), Addis Ababa, Ethiopia.
Eyasu TigabuThe Ohio State University Global One Health initiative (GOHi), Addis Ababa, Ethiopia.ORCID https://orcid.org/0000-0002-2362-9018
Zelalem MekuriaThe Ohio State University Global One Health initiative (GOHi), Columbus, OH, Unites States of America.
Getnet YimerPerelman School of Medicine, University of Pennsylvania, Philadelphia, PA, Unites States of America.
Nebiyu DerejeICAP at Columbia University, Addis Ababa, Ethiopia.
Jemal AliyICAP at Columbia University, Addis Ababa, Ethiopia.ORCID https://orcid.org/0009-0009-9545-0592
Sileshi LulsegedICAP at Columbia University, Addis Ababa, Ethiopia.ORCID https://orcid.org/0000-0001-6801-7034
Zenebe MelakuICAP at Columbia University, Addis Ababa, Ethiopia.
Ebba AbateThe Ohio State University Global One Health initiative (GOHi), Addis Ababa, Ethiopia.
Wondwossen GebreyesThe Ohio State University Global One Health initiative (GOHi), Columbus, OH, Unites States of America.
Mesfin WossenEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Aschalew AbaynehEthiopian Public Health Institute, Addis Ababa, Ethiopia.
Ethiopian Public Health Institute · ETAddis Ababa University · ETInternational Trachoma Initiative · ETOhio Department of Health · USUniversity of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SARS-CoV-2 co-infection with the influenza virus or human respiratory syncytial virus (RSV) may complicate its progress and clinical outcomes. However, data on the co-detection of SARS-CoV-2 with other respiratory viruses are limited in Ethiopia and other parts of Africa to inform evidence-based response and decision-making. We analyzed 4,989 patients' data captured from the national severe acute respiratory illness (SARI) and influenza-like illness (ILI) sentinel surveillance sites over 18 months period from January 01, 2021, to June 30, 2022. Laboratory specimens were collected from the patients and tested for viral respiratory pathogens by real-time, reverse transcription polymerase chain reaction (RT-PCR) at the national influenza center. The median age of the patients was 14 years (IQR: 1-35 years), with a slight preponderance of them being at the age of 15 to less than 50 years. SARS-CoV-2 was detected among 459 (9.2%, 95% CI: 8.4-10.0) patients, and 64 (1.3%, 95% CI: 1.0-1.6) of SARS-CoV-2 were co-detected either with Influenza virus (54.7%) or RSV (32.8%) and 12.5% were detected with both of the viruses. A substantial proportion (54.7%) of SARS-CoV-2 co-detection with other respiratory viruses was identified among patients in the age group from 15 to less than 50 years. The multivariable analysis found that the odds of SARS-CoV-2 co-detection was higher among individuals with the age category of 20 to 39 years as compared to those less than 20 years old (AOR: 1.98, 95%CI:1.15-3.42) while the odds of SARS-CoV-2 co-detection was lower among cases from other regions of the country as compared to those from Addis Ababa (AOR:0.16 95%CI:0.07-0.34). Although the SARS-CoV-2 co-detection with other respiratory viral pathogens was minimal, the findings of this study underscore that it is critical to continuously monitor the co-infections to reduce transmission and improve patient outcomes, particularly among the youth and patients with ILI.

Identifiers

PMID38635749
PMCPMC11025837
OpenAlexW4394933403

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.