Evidence map›Paper›PMID 38634973›Full record

ReviewPlant cell reports2024

Insights into plant regeneration: cellular pathways and DNA methylation dynamics.

Seunga Lee, Young Seo Park, Ji Hoon Rhee, Hyojeong Chu, Jennifer M Frost, Yeonhee Choi

Open access · hybridAbstract readReview
In one paragraph

Review in Plant cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. In Vitro Regeneration ofAntioxidants (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Establishment of a Tissue Culture System forPlants (Basel, Switzerland) · 2025
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Seunga Lee *Department of Biological Sciences, Seoul National University, Seoul, Korea.ORCID http://orcid.org/0000-0001-8488-439X
Young Seo Park *Department of Biological Sciences, Seoul National University, Seoul, Korea.ORCID http://orcid.org/0009-0003-9811-3766
Ji Hoon RheeDepartment of Biological Sciences, Seoul National University, Seoul, Korea.ORCID http://orcid.org/0009-0009-0480-2899
Hyojeong ChuDepartment of Biological Sciences, Seoul National University, Seoul, Korea.ORCID http://orcid.org/0009-0006-5621-1247
Jennifer M FrostGenomics and Child Health, The Blizard Institute, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0002-3057-6313
Yeonhee ChoiDepartment of Biological Sciences, Seoul National University, Seoul, Korea. yhc@snu.ac.kr.ORCID http://orcid.org/0000-0002-2796-5262
Seoul National University · KRQueen Mary University of London · GB

Funding

National Research Foundation of Korea 2020R1A2C2009382National Research Foundation of Korea 2021R1A5A1032428
6 · The paper itself

Abstract

Plants, known for their immobility, employ various mechanisms against stress and damage. A prominent feature is the formation of callus tissue-a cellular growth phenomenon that remains insufficiently explored, despite its distinctive cellular plasticity compared to vertebrates. Callus formation involves dedifferentiated cells, with a subset attaining pluripotency. Calluses exhibit an extraordinary capacity to reinitiate cellular division and undergo structural transformations, generating de novo shoots and roots, thereby developing into regenerated plants-a testament to the heightened developmental plasticity inherent in plants. In this way, plant regeneration through clonal propagation is a widely employed technique for vegetative reproduction. Thus, exploration of the biological components involved in regaining pluripotency contributes to the foundation upon which methods of somatic plant propagation can be advanced. This review provides an overview of the cellular pathway involved in callus and subsequent de novo shoot formation from already differentiated plant tissue, highlighting key genes critical to this process. In addition, it explores the intricate realm of epigenetic regulatory processes, emphasizing the nuanced dynamics of DNA methylation that contribute to plant regeneration. Finally, we briefly discuss somaclonal variation, examining its relation to DNA methylation, and investigating the heritability of epigenomic changes in crops.

Indexed as

Crops, AgriculturalDNA MethylationAnimalsCell DifferentiationCell DivisionCell ProliferationDedifferentiationDe novo organogenesisDNA methylationIn vitro regenerationPluripotencySomaclonal variation

Identifiers

PMID38634973
PMCPMC11026228
OpenAlexW4394921437

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.