Evidence map›Paper›PMID 38634802›Full record

ArticleNucleic acids research2024

The structure assessment web server: for proteins, complexes and more.

Andrew M Waterhouse, Gabriel Studer, Xavier Robin, Stefan Bienert, Gerardo Tauriello, Torsten Schwede

Abstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed.

  1. MultilevelCurrent research in structural biology · 2026
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  5. Unraveling the Glycosylation Machinery ofInternational journal of molecular sciences · 2026
    Article
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  7. Targeting Mutant Phenylalanine Hydroxylase With Pyrimidine-Triazole Conjugates: A Primary Framework for Candidate Chaperone-Based Strategies in Phenylketonuria.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Andrew M WaterhouseBiozentrum, University of Basel, Switzerland.ORCID 0009-0004-5717-6063
Gabriel StuderBiozentrum, University of Basel, Switzerland.ORCID 0000-0003-0462-1456
Xavier RobinBiozentrum, University of Basel, Switzerland.ORCID 0000-0002-6813-3200
Stefan BienertBiozentrum, University of Basel, Switzerland.ORCID 0000-0002-9673-9103
Gerardo TaurielloBiozentrum, University of Basel, Switzerland.ORCID 0000-0002-5921-7007
Torsten SchwedeBiozentrum, University of Basel, Switzerland.ORCID 0000-0003-2715-335X

Funding

SIB Swiss Institute of BioinformaticsUniversity of Basel
6 · The paper itself

Abstract

The 'structure assessment' web server is a one-stop shop for interactive evaluation and benchmarking of structural models of macromolecular complexes including proteins and nucleic acids. A user-friendly web dashboard links sequence with structure information and results from a variety of state-of-the-art tools, which facilitates the visual exploration and evaluation of structure models. The dashboard integrates stereochemistry information, secondary structure information, global and local model quality assessment of the tertiary structure of comparative protein models, as well as prediction of membrane location. In addition, a benchmarking mode is available where a model can be compared to a reference structure, providing easy access to scores that have been used in recent CASP experiments and CAMEO. The structure assessment web server is available at https://swissmodel.expasy.org/assess.

Indexed as

InternetModels, MolecularSoftwareProtein ConformationProteinsProteins

Identifiers

PMID38634802
PMCPMC11223858

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.