Evidence map›Paper›PMID 38633789›Full record

ArticlemedRxiv : the preprint server for health sciences2024

A Deep Learning Approach for Automated Extraction of Functional Status and New York Heart Association Class for Heart Failure Patients During Clinical Encounters.

Philip Adejumo, Phyllis Thangaraj, Lovedeep Singh Dhingra, Arya Aminorroaya, Xinyu Zhou, Cynthia Brandt, Hua Xu, Harlan M Krumholz, Rohan Khera

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Article in medRxiv : the preprint server for health sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Philip AdejumoSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.
Phyllis ThangarajSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.
Lovedeep Singh DhingraSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.ORCID 0000-0002-5664-4126
Arya AminorroayaSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.ORCID 0000-0003-3197-2657
Xinyu ZhouSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.
Cynthia BrandtVA Connecticut Healthcare System, West Haven, CT, USA.ORCID 0000-0001-8179-1796
Hua XuSection of Health Informatics, Department of Biostatistics, Yale School of Public Health, New Haven, CT.
Harlan M KrumholzSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.ORCID 0000-0003-2046-127X
Rohan KheraSection of Cardiovascular Medicine, Department of Internal Medicine, Yale School of Medicine, New Haven, CT.ORCID 0000-0001-9467-6199

Funding

Translating Personalized Inference from Randomized Clinical Trials to Real-World Cardiovascular CareR01HL167858 · NHLBI · YALE UNIVERSITY · PI Rohan Khera · 2024 to 2026
$2.3M
Evaluating and Improving Utilization of Evidence-Based Medical Therapy in Patients with Heart Failure using Automated Tools in the Electronic Health RecordK23HL153775 · NHLBI · YALE UNIVERSITY · PI KHERA, ROHAN · 2021 to 2025
$918k
Deep Learning-enhanced Evaluation of Quality of Care and Disparities Among Patients with Heart Failure in the Electronic Health RecordF30HL176149 · NHLBI · YALE UNIVERSITY · PI ADEJUMO, PHILIP O · 2024 to 2025
$91k
NHLBI NIH HHS F30 HL176149NHLBI NIH HHS K23 HL153775NHLBI NIH HHS R01 HL167858
6 · The paper itself

Abstract

Introduction: Serial functional status assessments are critical to heart failure (HF) management but are often described narratively in documentation, limiting their use in quality improvement or patient selection for clinical trials. We developed and validated a deep learning-based natural language processing (NLP) strategy to extract functional status assessments from unstructured clinical notes. Methods: We identified 26,577 HF patients across outpatient services at Yale New Haven Hospital (YNHH), Greenwich Hospital (GH), and Northeast Medical Group (NMG) (mean age 76.1 years; 52.0% women). We used expert annotated notes from YNHH for model development/internal testing and from GH and NMG for external validation. The primary outcomes were NLP models to detect (a) explicit New York Heart Association (NYHA) classification, (b) HF symptoms during activity or rest, and (c) functional status assessment frequency. Results: Among 3,000 expert-annotated notes, 13.6% mentioned NYHA class, and 26.5% described HF symptoms. The model to detect NYHA classes achieved a class-weighted AUROC of 0.99 (95% CI: 0.98-1.00) at YNHH, 0.98 (0.96-1.00) at NMG, and 0.98 (0.92-1.00) at GH. The activity-related HF symptom model achieved an AUROC of 0.94 (0.89-0.98) at YNHH, 0.94 (0.91-0.97) at NMG, and 0.95 (0.92-0.99) at GH. Deploying the NYHA model among 166,655 unannotated notes from YNHH identified 21,528 (12.9%) with NYHA mentions and 17,642 encounters (10.5%) classifiable into functional status groups based on activity-related symptoms. Conclusions: We developed and validated an NLP approach to extract NYHA classification and activity-related HF symptoms from clinical notes, enhancing the ability to track optimal care and identify trial-eligible patients.

Identifiers

PMID38633789
PMCPMC11023654

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.