Evidence map›Paper›PMID 38632239›Full record

ArticleNature communications2024

Molecular robotic agents that survey molecular landscapes for information retrieval.

Sungwook Woo, Sinem K Saka, Feng Xuan, Peng Yin

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Proximity-activated DNA scanning encoded sequencing for massive access to membrane proteins nanoscale organization.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sungwook WooWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, 02115, USA. swoo@postech.edu.ORCID http://orcid.org/0000-0003-3646-1426
Sinem K SakaWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, 02115, USA.ORCID http://orcid.org/0000-0002-5017-379X
Feng XuanWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, 02115, USA.
Peng YinWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, 02115, USA. py@hms.harvard.edu.ORCID http://orcid.org/0000-0002-2769-6357

Funding

High-throughput single-molecule protein identification via super-resolution imagingDP1GM133052 · NIGMS · HARVARD UNIVERSITY · PI YIN, PENG · 2018 to 2022
$6.6M
Decoding chromosome structure with multiplexed super-resolution microscopyR01GM124401 · NIGMS · HARVARD UNIVERSITY · PI YIN, PENG · 2018 to 2021
$2.5M
NIGMS NIH HHS DP1 GM133052NIGMS NIH HHS R01 GM124401
6 · The paper itself

Abstract

DNA-based artificial motors have allowed the recapitulation of biological functions and the creation of new features. Here, we present a molecular robotic system that surveys molecular environments and reports spatial information in an autonomous and repeated manner. A group of molecular agents, termed 'crawlers', roam around and copy information from DNA-labeled targets, generating records that reflect their trajectories. Based on a mechanism that allows random crawling, we show that our system is capable of counting the number of subunits in example molecular complexes. Our system can also detect multivalent proximities by generating concatenated records from multiple local interactions. We demonstrate this capability by distinguishing colocalization patterns of three proteins inside fixed cells under different conditions. These mechanisms for examining molecular landscapes may serve as a basis towards creating large-scale detailed molecular interaction maps inside the cell with nanoscale resolution.

Indexed as

Robotic Surgical ProceduresBiophysical PhenomenaDNAInformation Storage and RetrievalProteinsDNAProteins

Identifiers

PMID38632239
PMCPMC11024175

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.