Evidence map›Paper›PMID 38631728›Full record

ArticleGenome research2024

Probabilistic association of differentially expressed genes with

Brian S Roberts, Ashlyn G Anderson, E Christopher Partridge, Gregory M Cooper, Richard M Myers

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brian S RobertsHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.ORCID 0009-0001-2914-6826
Ashlyn G AndersonHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.ORCID 0000-0003-0090-706X
E Christopher PartridgeHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Gregory M CooperHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
Richard M MyersHudsonAlpha Institute for Biotechnology, Huntsville, Alabama 35806, USA.
HudsonAlpha Institute for Biotechnology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Differential gene expression in response to perturbations is mediated at least in part by changes in binding of transcription factors (TFs) and other proteins at specific genomic regions. Association of these

Indexed as

ChromatinTranscription FactorsGene Expression RegulationHumansRegulatory Elements, TranscriptionalRegulatory Sequences, Nucleic AcidChromatinTranscription Factors

Identifiers

PMID38631728
PMCPMC11146588
OpenAlexW4394891722

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.