Evidence map›Paper›PMID 38630982›Full record

ArticleMedical physics2024

High-resolution 3T to 7T ADC map synthesis with a hybrid CNN-transformer model.

Zach Eidex, Jing Wang, Mojtaba Safari, Eric Elder, Jacob Wynne, Tonghe Wang, Hui-Kuo Shu, Hui Mao, Xiaofeng Yang

Abstract read
In one paragraph

Article in Medical physics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zach EidexDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.
Jing WangDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.
Mojtaba SafariDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.
Eric ElderDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.
Jacob WynneDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.
Tonghe WangDepartment of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Hui-Kuo ShuDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.
Hui MaoWinship Cancer Institute, Emory University, Atlanta, Georgia, USA.
Xiaofeng YangDepartment of Radiation Oncology, Emory University, Atlanta, Georgia, USA.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
eXtended Modular ANthropomorphic (XMAN) phantom for Imaging and Treatment Optimization in Radiotherapy.R01EB032680 · NIBIB · UNIVERSITY OF MARYLAND BALTIMORE · PI REN, LEI, YANG, XIAOFENG · 2022 to 2025
$2.4M
Real-time Volumetric Imaging for Motion Management and Dose Delivery VerificationR01CA272991 · NCI · EMORY UNIVERSITY · PI Zhen Tian, Xiaofeng Yang · 2023 to 2026
$2.3M
Multiparametric MRI-guided Prostate HDR Brachytherapy with Focal Tumor BoostR01CA215718 · NCI · EMORY UNIVERSITY · PI YANG, XIAOFENG · 2018 to 2022
$1.8M
Artificial Intelligence Driven Automatic Treatment Planning of Stereotactic Radiosurgery for the Management of Multiple Brain MetastasesR37CA272755 · NCI · UNIVERSITY OF CHICAGO · PI Zhen Tian · 2022 to 2026
$1.8M
Intelligent and Personalized Online Adaptive Proton TherapyR01DE033512 · NIDCR · UNIVERSITY OF CHICAGO · PI Zhen Tian, Xiaofeng Yang · 2024 to 2026
$1.8M
Artificial Intelligence Driven Platform for PET/MR ImagingR56EB033332 · NIBIB · EMORY UNIVERSITY · PI MAO, HUI, YANG, XIAOFENG · 2022 to 2022
$764k
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA215718NCI NIH HHS R01 CA272991NCI NIH HHS R37 CA272755NIBIB NIH HHS R01 EB032680NIBIB NIH HHS R56 EB033332NIDCR NIH HHS R01 DE033512NIH HHS P30CA008748NIH HHS R01CA215718NIH HHS R01EB032680NIH HHS R37CA272755NIH HHS R56EB033332
6 · The paper itself

Abstract

background7 Tesla (7T) apparent diffusion coefficient (ADC) maps derived from diffusion-weighted imaging (DWI) demonstrate improved image quality and spatial resolution over 3 Tesla (3T) ADC maps. However, 7T magnetic resonance imaging (MRI) currently suffers from limited clinical unavailability, higher cost, and increased susceptibility to artifacts. PURPOSE: To address these issues, we propose a hybrid CNN-transformer model to synthesize high-resolution 7T ADC maps from multimodal 3T MRI.

methodsThe Vision CNN-Transformer (VCT), composed of both Vision Transformer (ViT) blocks and convolutional layers, is proposed to produce high-resolution synthetic 7T ADC maps from 3T ADC maps and 3T T1-weighted (T1w) MRI. ViT blocks enabled global image context while convolutional layers efficiently captured fine detail. The VCT model was validated on the publicly available Human Connectome Project Young Adult dataset, comprising 3T T1w, 3T DWI, and 7T DWI brain scans. The Diffusion Imaging in Python library was used to compute ADC maps from the DWI scans. A total of 171 patient cases were randomly divided into 130 training cases, 20 validation cases, and 21 test cases. The synthetic ADC maps were evaluated by comparing their similarity to the ground truth volumes with the following metrics: peak signal-to-noise ratio (PSNR), structural similarity index measure (SSIM), and mean squared error (MSE). In addition,

resultsThe results are as follows: PSNR: 27.0 ± 0.9 dB, SSIM: 0.945 ± 0.010, and MSE: 2.0E-3 ± 0.4E-3. Both qualitative and quantitative results demonstrate that VCT performs favorably against other state-of-the-art methods. We have introduced various efficiency improvements, including the implementation of flash attention and training on 176×208 resolution images. These enhancements have resulted in the reduction of parameters and training time per epoch by 50% in comparison to ResViT. Specifically, the training time per epoch has been shortened from 7.67 min to 3.86 min.

conclusionWe propose a novel method to predict high-resolution 7T ADC maps from low-resolution 3T ADC maps and T1w MRI. Our predicted images demonstrate better spatial resolution and contrast compared to 3T MRI and prediction results made by ResViT and pix2pix. These high-quality synthetic 7T MR images could be beneficial for disease diagnosis and intervention, producing higher resolution and conformal contours, and as an intermediate step in generating synthetic CT for radiation therapy, especially when 7T MRI scanners are unavailable.

Indexed as

Image Processing, Computer-AssistedNeural Networks, ComputerBrainDiffusion Magnetic Resonance ImagingHumansMagnetic Resonance Imaging7T MRIdeep learningDWIintramodal MRI synthesis

Identifiers

PMID38630982
PMCPMC11650373

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.