Evidence map›Paper›PMID 38630900›Full record

ArticleThe Plant cell2024

The GRAS transcription factor CsTL regulates tendril formation in cucumber.

Junjun Shen, Yanxin Jiang, Jian Pan, Linhan Sun, Qingqing Li, Wenjing He, Piaoyun Sun, Bosi Zhao, Hongjiao Zhao, Xubo Ke and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Junjun ShenCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0000-0001-8321-1521
Yanxin JiangCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0009-6539-2846
Jian PanCollege of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning 110866, China.ORCID 0009-0005-9764-9686
Linhan SunDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA.ORCID 0000-0003-1406-0568
Qingqing LiCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0005-5899-054X
Wenjing HeCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0001-2225-5050
Piaoyun SunCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0006-4655-1520
Bosi ZhaoCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0004-9502-8651
Hongjiao ZhaoCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0003-1129-4163
Xubo KeCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0004-4740-4472
Yalu GuoCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0004-1450-6843
Tongwen YangCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0009-0004-2559-8130
Zheng LiCollege of Horticulture, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID 0000-0002-3188-8300
Northwest A&F University · CNPennsylvania State University · USShenyang Agricultural University · CN

Funding

Key Research and Development Program of Shaanxi 2023-YBNY-011National Key Research and Development Program of China 2022YFD1602000National Natural Science Foundation of China 32202519Technology Innovation Team of Shaanxi 2021TD-32
6 · The paper itself

Abstract

Cucumber (Cucumis sativus, Cs) tendrils are slender vegetative organs that typically require manual removal to ensure orderly growth during greenhouse cultivation. Here, we identified cucumber tendril-less (tl), a Tnt1 retrotransposon-induced insertion mutant lacking tendrils. Map-based cloning identified the mutated gene, CsaV3_3G003590, which we designated as CsTL, which is homologous to Arabidopsis thaliana LATERAL SUPPRESSOR (AtLAS). Knocking out CsTL repressed tendril formation but did not affect branch initiation, whereas overexpression (OE) of CsTL resulted in the formation of two or more tendrils in one leaf axil. Although expression of two cucumber genes regulating tendril formation, Tendril (CsTEN) and Unusual Floral Organs (CsUFO), was significantly decreased in CsTL knockout lines, these two genes were not direct downstream targets of CsTL. Instead, CsTL physically interacted with CsTEN, an interaction that further enhanced CsTEN-mediated expression of CsUFO. In Arabidopsis, the CsTL homolog AtLAS acts upstream of REVOLUTA (REV) to regulate branch initiation. Knocking out cucumber CsREV inhibited branch formation without affecting tendril initiation. Furthermore, genomic regions containing CsTL and AtLAS were not syntenic between the cucumber and Arabidopsis genomes, whereas REV orthologs were found on a shared syntenic block. Our results revealed not only that cucumber CsTL possesses a divergent function in promoting tendril formation but also that CsREV retains its conserved function in shoot branching.

Indexed as

ArabidopsisCucumis sativusGene Expression Regulation, PlantPlant ProteinsTranscription FactorsPlant LeavesPlants, Genetically ModifiedPlant ProteinsTranscription Factors

Identifiers

PMID38630900
PMCPMC11289639
OpenAlexW4394892931

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.