Evidence map›Paper›PMID 38628155›Full record

ArticleJournal of experimental botany2024

GABA does not regulate stomatal CO2 signalling in Arabidopsis.

Adriane Piechatzek, Xueying Feng, Na Sai, Changyu Yi, Bhavna Hurgobin, Mathew Lewsey, Johannes Herrmann, Marcus Dittrich, Peter Ache, Tobias Müller and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Stomata: custodians of leaf gaseous exchange.Journal of experimental botany · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 5 countries.

Adriane PiechatzekPlant Transport and Signalling Lab, ARC Centre of Excellence in Plant Energy Biology, Waite Research Institute, Glen Osmond, SA 5064, Australia.ORCID 0000-0002-7958-5771
Xueying FengPlant Transport and Signalling Lab, ARC Centre of Excellence in Plant Energy Biology, Waite Research Institute, Glen Osmond, SA 5064, Australia.ORCID 0000-0002-9573-6082
Na SaiPlant Transport and Signalling Lab, ARC Centre of Excellence in Plant Energy Biology, Waite Research Institute, Glen Osmond, SA 5064, Australia.ORCID 0000-0002-9482-6115
Changyu YiLa Trobe Institute for Agriculture and Food, AgriBio Building, La Trobe University, Bundoora, VIC 3086, Australia.ORCID 0000-0003-3839-2292
Bhavna HurgobinLa Trobe Institute for Agriculture and Food, AgriBio Building, La Trobe University, Bundoora, VIC 3086, Australia.ORCID 0000-0001-9603-2493
Mathew LewseyLa Trobe Institute for Agriculture and Food, AgriBio Building, La Trobe University, Bundoora, VIC 3086, Australia.ORCID 0000-0002-2631-4337
Johannes HerrmannInstitute for Molecular Plant Physiology and Biophysics, University of Würzburg, Würzburg 97078, Germany.
Marcus DittrichDepartment of Bioinformatics, University of Würzburg, Würzburg 97078, Germany.ORCID 0000-0002-7726-5491
Peter AcheInstitute for Molecular Plant Physiology and Biophysics, University of Würzburg, Würzburg 97078, Germany.ORCID 0000-0002-2902-7552
Tobias MüllerDepartment of Bioinformatics, University of Würzburg, Würzburg 97078, Germany.ORCID 0000-0003-3035-7070
Johannes KromdijkDepartment of Plant Sciences, University of Cambridge, Downing St., Cambridge, CB2 3EA, UK.ORCID 0000-0003-4423-4100
Rainer HedrichInstitute for Molecular Plant Physiology and Biophysics, University of Würzburg, Würzburg 97078, Germany.ORCID 0000-0003-3224-1362
Bo XuPlant Transport and Signalling Lab, ARC Centre of Excellence in Plant Energy Biology, Waite Research Institute, Glen Osmond, SA 5064, Australia.ORCID 0000-0002-7583-2384
Matthew GillihamPlant Transport and Signalling Lab, ARC Centre of Excellence in Plant Energy Biology, Waite Research Institute, Glen Osmond, SA 5064, Australia.ORCID 0000-0003-0666-3078
ARC Centre of Excellence in Plant Energy Biology · AUUniversity of Würzburg · DELa Trobe University · AUAustralian Research Council · AUUniversity of Cambridge · GB

Funding

University of Adelaide CE230100015
6 · The paper itself

Abstract

Optimal stomatal regulation is important for plant adaptation to changing environmental conditions and for maintaining crop yield. The guard cell signal γ-aminobutyric acid (GABA) is produced from glutamate by glutamate decarboxylase (GAD) during a reaction that generates CO2 as a by-product. Here, we investigated a putative connection between GABA signalling and the more clearly defined CO2 signalling pathway in guard cells. The GABA-deficient mutant Arabidopsis lines gad2-1, gad2-2, and gad1/2/4/5 were examined for stomatal sensitivity to various CO2 concentrations. Our findings show a phenotypical discrepancy between the allelic mutant lines gad2-1 and gad2-2-a weakened CO2 response in gad2-1 (GABI_474_E05) in contrast to a wild-type response in gad2-2 (SALK_028819) and gad1/2/4/5. Through transcriptomic and genomic investigation, we traced the response of gad2-1 to a deletion of full-length Mitogen-activated protein kinase 12 (MPK12) in the GABI-KAT line, thereafter renamed as gad2-1*. Guard cell-specific complementation of MPK12 in gad2-1* restored the wild-type CO2 phenotype, which confirms the proposed importance of MPK12 in CO2 sensitivity. Additionally, we found that stomatal opening under low atmospheric CO2 occurs independently of the GABA-modulated opening channel ALUMINIUM-ACTIVATED MALATE TRANSPORTER 9 (ALMT9). Our results demonstrate that GABA has a role in modulating the rate of stomatal opening and closing, but not in response to CO2per se.

Indexed as

ArabidopsisArabidopsis ProteinsCarbon Dioxidegamma-Aminobutyric AcidPlant StomataSignal TransductionGlutamate DecarboxylaseArabidopsis ProteinsCarbon Dioxidegamma-Aminobutyric AcidGlutamate DecarboxylaseALMTsCO2 signallingGABAgenomicsMPK12stomatal movement

Identifiers

PMID38628155
PMCPMC11565201
OpenAlexW4394873079

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.