Evidence map›Paper›PMID 38627633›Full record

ArticleBMC plant biology2024

From buds to shoots: insights into grapevine development from the Witch's Broom bud sport.

Eleanore J Ritter, Peter Cousins, Michelle Quigley, Aidan Kile, Sunil K Kenchanmane Raju, Daniel H Chitwood, Chad Niederhuth

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Eleanore J RitterDepartment of Plant Biology, Michigan State University, East Lansing, MI, USA.
Peter CousinsE. & J. Gallo Winery, Modesto, CA, USA.
Michelle QuigleyDepartment of Horticulture, Michigan State University, East Lansing, MI, USA.
Aidan KileDepartment of Plant Biology, Michigan State University, East Lansing, MI, USA.
Sunil K Kenchanmane RajuDepartment of Plant Biology, Michigan State University, East Lansing, MI, USA.
Daniel H ChitwoodDepartment of Horticulture, Michigan State University, East Lansing, MI, USA.
Chad NiederhuthDepartment of Plant Biology, Michigan State University, East Lansing, MI, USA. niederhu@msu.edu.

Funding

Division of Integrative Organismal Systems IOS-2310355, IOS-2310356, and IOS-2310357National Institute of Food and Agriculture MICL02572
6 · The paper itself

Abstract

backgroundBud sports occur spontaneously in plants when new growth exhibits a distinct phenotype from the rest of the parent plant. The Witch's Broom bud sport occurs occasionally in various grapevine (Vitis vinifera) varieties and displays a suite of developmental defects, including dwarf features and reduced fertility. While it is highly detrimental for grapevine growers, it also serves as a useful tool for studying grapevine development. We used the Witch's Broom bud sport in grapevine to understand the developmental trajectories of the bud sports, as well as the potential genetic basis. We analyzed the phenotypes of two independent cases of the Witch's Broom bud sport, in the Dakapo and Merlot varieties of grapevine, alongside wild type counterparts. To do so, we quantified various shoot traits, performed 3D X-ray Computed Tomography on dormant buds, and landmarked leaves from the samples. We also performed Illumina and Oxford Nanopore sequencing on the samples and called genetic variants using these sequencing datasets.

resultsThe Dakapo and Merlot cases of Witch's Broom displayed severe developmental defects, with no fruit/clusters formed and dwarf vegetative features. However, the Dakapo and Merlot cases of Witch's Broom studied were also phenotypically different from one another, with distinct differences in bud and leaf development. We identified 968-974 unique genetic mutations in our two Witch's Broom cases that are potential causal variants of the bud sports. Examining gene function and validating these genetic candidates through PCR and Sanger-sequencing revealed one strong candidate mutation in Merlot Witch's Broom impacting the gene GSVIVG01008260001.

conclusionsThe Witch's Broom bud sports in both varieties studied had dwarf phenotypes, but the two instances studied were also vastly different from one another and likely have distinct genetic bases. Future work on Witch's Broom bud sports in grapevine could provide more insight into development and the genetic pathways involved in grapevine.

Indexed as

Plant LeavesVitisGene Expression Regulation, PlantBud sportClonal propagationDevelopmentGrapevineSomatic mutationsVitis vinifera

Identifiers

PMID38627633
PMCPMC11020879

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.