Evidence map›Paper›PMID 38627586›Full record

ArticleLeukemia2024

Autophagy degrades immunogenic endogenous retroelements induced by 5-azacytidine in acute myeloid leukemia.

Nandita Noronha, Chantal Durette, Maxime Cahuzac, Bianca E Silva, Justine Courtois, Juliette Humeau, Allan Sauvat, Marie-Pierre Hardy, Krystel Vincent, Jean-Philippe Laverdure and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Nandita NoronhaIRIC, Université de Montréal, Montreal, QC, Canada.ORCID 0000-0003-4611-1470
Chantal DuretteIRIC, Université de Montréal, Montreal, QC, Canada.
Maxime CahuzacIRIC, Université de Montréal, Montreal, QC, Canada.ORCID 0000-0002-5395-8090
Bianca E SilvaGIGA Institute, Laboratory of Hematology, University of Liege, Liege, Belgium.
Justine CourtoisGIGA Institute, Laboratory of Hematology, University of Liege, Liege, Belgium.
Juliette HumeauIRIC, Université de Montréal, Montreal, QC, Canada.
Allan SauvatEquipe labellisée par la Ligue contre le Cancer, Université de Paris, Sorbonne Université, Inserm U1138, Institut Universitaire de France, Paris, France.ORCID 0000-0001-7076-8638
Marie-Pierre HardyIRIC, Université de Montréal, Montreal, QC, Canada.
Krystel VincentIRIC, Université de Montréal, Montreal, QC, Canada.
Jean-Philippe LaverdureIRIC, Université de Montréal, Montreal, QC, Canada.ORCID 0000-0002-9245-6413
Joël LanoixIRIC, Université de Montréal, Montreal, QC, Canada.
Frédéric BaronGIGA Institute, Laboratory of Hematology, University of Liege, Liege, Belgium.
Pierre Thibault *IRIC, Université de Montréal, Montreal, QC, Canada.
Claude Perreault *IRIC, Université de Montréal, Montreal, QC, Canada.ORCID 0000-0001-9453-7383
Gregory Ehx *IRIC, Université de Montréal, Montreal, QC, Canada. g.ehx@uliege.be.ORCID 0000-0002-7018-1770
Université de Montréal · CAUniversity of Liège · BEInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hypomethylating agent 5-azacytidine (AZA) is the first-line treatment for AML patients unfit for intensive chemotherapy. The effect of AZA results in part from T-cell cytotoxic responses against MHC-I-associated peptides (MAPs) deriving from hypermethylated genomic regions such as cancer-testis antigens (CTAs), or endogenous retroelements (EREs). However, evidence supporting higher ERE MAPs presentation after AZA treatment is lacking. Therefore, using proteogenomics, we examined the impact of AZA on the repertoire of MAPs and their source transcripts. AZA-treated AML upregulated both CTA and ERE transcripts, but only CTA MAPs were presented at greater levels. Upregulated ERE transcripts triggered innate immune responses against double-stranded RNAs but were degraded by autophagy, and not processed into MAPs. Autophagy resulted from the formation of protein aggregates caused by AZA-dependent inhibition of DNMT2. Autophagy inhibition had an additive effect with AZA on AML cell proliferation and survival, increased ERE levels, increased pro-inflammatory responses, and generated immunogenic tumor-specific ERE-derived MAPs. Finally, autophagy was associated with a lower abundance of CD8

Indexed as

Antimetabolites, AntineoplasticAutophagyAzacitidineLeukemia, Myeloid, AcuteAntigens, NeoplasmCell ProliferationDNA MethylationHumansAntigens, NeoplasmAntimetabolites, AntineoplasticAzacitidine

Identifiers

PMID38627586
PMCPMC11073987
OpenAlexW4394872794

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.