Evidence map›Paper›PMID 38627419›Full record

ArticleNature communications2024

Exposing the molecular heterogeneity of glycosylated biotherapeutics.

Luis F Schachner, Christopher Mullen, Wilson Phung, Joshua D Hinkle, Michelle Irwin Beardsley, Tracy Bentley, Peter Day, Christina Tsai, Siddharth Sukumaran, Tomasz Baginski and 10 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Extending Serum IgG1 Antibody Repertoire Coverage Using DIA-PTCR.Journal of the American Society for Mass Spectrometry · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. AsymmetricJournal of the American Chemical Society · 2024
    Article
  18. Cracking the diversity of sweet drugs.Nature chemical biology · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Luis F SchachnerDepartment of Microchemistry, Proteomics and Lipidomics, Genentech, Inc., South San Francisco, CA, USA.
Christopher MullenLife Sciences Mass Spectrometry, Thermo Fisher Scientific, Inc., San Jose, CA, USA.
Wilson PhungDepartment of Microchemistry, Proteomics and Lipidomics, Genentech, Inc., South San Francisco, CA, USA.
Joshua D HinkleLife Sciences Mass Spectrometry, Thermo Fisher Scientific, Inc., San Jose, CA, USA.
Michelle Irwin BeardsleyPharmaceutical Technical Development, Genentech, Inc., South San Francisco, CA, USA.ORCID http://orcid.org/0009-0004-8484-3845
Tracy BentleyPharmaceutical Technical Development, Genentech, Inc., South San Francisco, CA, USA.
Peter DayPharmaceutical Technical Development, Genentech, Inc., South San Francisco, CA, USA.
Christina TsaiPharmaceutical Technical Development, Genentech, Inc., South San Francisco, CA, USA.
Siddharth SukumaranPharmaceutical Technical Development, Genentech, Inc., South San Francisco, CA, USA.
Tomasz BaginskiPharmaceutical Technical Development, Genentech, Inc., South San Francisco, CA, USA.
Danielle DiCaraDepartment of Antibody Engineering, Genentech, Inc., South San Francisco, CA, USA.
Nicholas J AgardDepartment of Antibody Engineering, Genentech, Inc., South San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-4916-2484
Matthieu MasureelDepartment of Structural Biology, Genentech, Inc., South San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-4059-6166
Joshua GoberDepartment of Protein Chemistry, Genentech, Inc., South San Francisco, CA, USA.
Adel M ElSohlyDepartment of Protein Chemistry, Genentech, Inc., South San Francisco, CA, USA.
Rafael MelaniLife Sciences Mass Spectrometry, Thermo Fisher Scientific, Inc., San Jose, CA, USA.
John E P SykaLife Sciences Mass Spectrometry, Thermo Fisher Scientific, Inc., San Jose, CA, USA.
Romain HuguetLife Sciences Mass Spectrometry, Thermo Fisher Scientific, Inc., San Jose, CA, USA.
Michael T MartyDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ, USA.
Wendy SandovalDepartment of Microchemistry, Proteomics and Lipidomics, Genentech, Inc., South San Francisco, CA, USA. wendys@gene.com.ORCID http://orcid.org/0000-0002-4672-0762

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The heterogeneity inherent in today's biotherapeutics, especially as a result of heavy glycosylation, can affect a molecule's safety and efficacy. Characterizing this heterogeneity is crucial for drug development and quality assessment, but existing methods are limited in their ability to analyze intact glycoproteins or other heterogeneous biotherapeutics. Here, we present an approach to the molecular assessment of biotherapeutics that uses proton-transfer charge-reduction with gas-phase fractionation to analyze intact heterogeneous and/or glycosylated proteins by mass spectrometry. The method provides a detailed landscape of the intact molecular weights present in biotherapeutic protein preparations in a single experiment. For glycoproteins in particular, the method may offer insights into glycan composition when coupled with a suitable bioinformatic strategy. We tested the approach on various biotherapeutic molecules, including Fc-fusion, VHH-fusion, and peptide-bound MHC class II complexes to demonstrate efficacy in measuring the proteoform-level diversity of biotherapeutics. Notably, we inferred the glycoform distribution for hundreds of molecular weights for the eight-times glycosylated fusion drug IL22-Fc, enabling correlations between glycoform sub-populations and the drug's pharmacological properties. Our method is broadly applicable and provides a powerful tool to assess the molecular heterogeneity of emerging biotherapeutics.

Indexed as

GlycoproteinsPolysaccharidesGlycosylationMass SpectrometryGlycoproteinsPolysaccharides

Identifiers

PMID38627419
PMCPMC11021452

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.