Evidence map›Paper›PMID 38627264›Full record

ArticleBulletin of mathematical biology2024

Minimal Mechanisms of Microtubule Length Regulation in Living Cells.

Anna C Nelson, Melissa M Rolls, Maria-Veronica Ciocanel, Scott A McKinley

Abstract read
In one paragraph

Article in Bulletin of mathematical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Anna C NelsonDepartment of Mathematics, Duke University, Durham, NC, 27710, USA. anelson@math.duke.edu.ORCID http://orcid.org/0000-0002-6690-9095
Melissa M RollsDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, State College, PA, 16801, USA.ORCID http://orcid.org/0000-0002-5021-4360
Maria-Veronica Ciocanel *Department of Mathematics, Duke University, Durham, NC, 27710, USA.
Scott A McKinley *Department of Mathematics, Tulane University, New Orleans, LA, 70118, USA.

Funding

Pairing Modeling and Experiment to Understand Microtubule Behavior in Healthy and Injured NeuronsR01NS121245 · NINDS · PENNSYLVANIA STATE UNIVERSITY, THE · PI Maria-Veronica Ciocanel, Scott A McKinley · 2022 to 2026
$1.5M
NIH HHS R01NS121245NINDS NIH HHS R01 NS121245
6 · The paper itself

Abstract

The microtubule cytoskeleton is responsible for sustained, long-range intracellular transport of mRNAs, proteins, and organelles in neurons. Neuronal microtubules must be stable enough to ensure reliable transport, but they also undergo dynamic instability, as their plus and minus ends continuously switch between growth and shrinking. This process allows for continuous rebuilding of the cytoskeleton and for flexibility in injury settings. Motivated by in vivo experimental data on microtubule behavior in Drosophila neurons, we propose a mathematical model of dendritic microtubule dynamics, with a focus on understanding microtubule length, velocity, and state-duration distributions. We find that limitations on microtubule growth phases are needed for realistic dynamics, but the type of limiting mechanism leads to qualitatively different responses to plausible experimental perturbations. We therefore propose and investigate two minimally-complex length-limiting factors: limitation due to resource (tubulin) constraints and limitation due to catastrophe of large-length microtubules. We combine simulations of a detailed stochastic model with steady-state analysis of a mean-field ordinary differential equations model to map out qualitatively distinct parameter regimes. This provides a basis for predicting changes in microtubule dynamics, tubulin allocation, and the turnover rate of tubulin within microtubules in different experimental environments.

Indexed as

Models, BiologicalTubulinCytoskeletonMathematical ConceptsMicrotubulesTubulinMicrotubule turnoverOrdinary differential equationsParameterizationStochastic modeling

Identifiers

PMID38627264
PMCPMC11413797

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.