Evidence map›Paper›PMID 38626574›Full record

ArticleGenetics and molecular biology2024

Investigating the shared genetic architecture between breast and ovarian cancers.

Xuezhong Shi, Anqi Bu, Yongli Yang, Yuping Wang, Chenyu Zhao, Jingwen Fan, Chaojun Yang, Xiaocan Jia

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Xuezhong ShiZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Anqi BuZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Yongli YangZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Yuping WangZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Chenyu ZhaoZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Jingwen FanZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Chaojun YangZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.
Xiaocan JiaZhengzhou University, College of Public Health, Department of Epidemiology and Biostatistics, Zhengzhou, Henan, China.ORCID http://orcid.org/0000-0002-8690-2667
Zhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High heritability and strong correlation have been observed in breast and ovarian cancers. However, their shared genetic architecture remained unclear. Linkage disequilibrium score regression (LDSC) and heritability estimation from summary statistics (ρ-HESS) were applied to estimate heritability and genetic correlations. Bivariate causal mixture model (MiXeR) was used to qualify the polygenic overlap. Then, stratified-LDSC (S-LDSC) was used to identify tissue and cell type specificity. Meanwhile, the adaptive association test called MTaSPUsSet was performed to identify potential pleiotropic genes. The Single Nucleotide Polymorphisms (SNP) heritability was 13% for breast cancer and 5% for ovarian cancer. There was a significant genetic correlation between breast and ovarian cancers (rg=0.21). Breast and ovarian cancers exhibited polygenic overlap, sharing 0.4 K out 2.8 K of causal variants. Tissue and cell type specificity displayed significant enrichment in female breast mammary, uterus, kidney tissues, and adipose cell. Moreover, the 74 potential pleiotropic genes were identified between breast and ovarian cancers, which were related to the regulation of cell cycle and cell death. We quantified the shared genetic architecture between breast and ovarian cancers and shed light on the biological basis of the co-morbidity. Ultimately, these findings facilitated the understanding of disease etiology.

Identifiers

PMID38626574
PMCPMC11021043
OpenAlexW4394852728

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.