Evidence map›Paper›PMID 38625949›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Milestoning estimators of dissipation in systems observed at a coarse resolution.

Kristian Blom, Kevin Song, Etienne Vouga, Aljaž Godec, Dmitrii E Makarov

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Identification and quantification of irreversibility in stochastic systems.Physical chemistry chemical physics : PCCP · 2026
    Review
  2. Article
  3. Stochastic thermodynamics for biological functions.Quantitative biology (Beijing, China) · 2025
    Review
  4. Article
  5. General theory for localizing the where and when of entropy production meets single-molecule experiments.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Milestoning estimators of dissipation in systems observed at a coarse resolution.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kristian BlomMathematical biophysics Group, Max Planck Institute for Multidisciplinary Sciences, Göttingen 37077, Germany.ORCID 0000-0001-6582-8448
Kevin SongDepartment of Computer Science, University of Texas at Austin, Austin, TX 78712.
Etienne VougaDepartment of Computer Science, University of Texas at Austin, Austin, TX 78712.
Aljaž GodecMathematical biophysics Group, Max Planck Institute for Multidisciplinary Sciences, Göttingen 37077, Germany.ORCID 0000-0003-1888-6666
Dmitrii E MakarovDepartment of Chemistry and Oden Institute for Computational Engineering and Sciences, University of Texas at Austin, Austin, TX 78712.ORCID 0000-0002-8421-1846

Funding

Adobe, Inc n/aAlexander von Humboldt-Stiftung (AvH) n/aDeutsche Forschungsgemeinschaft (DFG) Heisenberg Program grant GO 2762/4-1National Science Foundation (NSF) IIS 2212048NSF | MPS | Division of Chemistry (CHE) 1955552Welch Foundation (The Welch Foundation) F-1514
6 · The paper itself

Abstract

Many nonequilibrium, active processes are observed at a coarse-grained level, where different microscopic configurations are projected onto the same observable state. Such "lumped" observables display memory, and in many cases, the irreversible character of the underlying microscopic dynamics becomes blurred, e.g., when the projection hides dissipative cycles. As a result, the observations appear less irreversible, and it is very challenging to infer the degree of broken time-reversal symmetry. Here we show, contrary to intuition, that by ignoring parts of the already coarse-grained state space we may-via a process called milestoning-improve entropy-production estimates. We present diverse examples where milestoning systematically renders observations "closer to underlying microscopic dynamics" and thereby improves thermodynamic inference from lumped data assuming a given range of memory, and we hypothesize that this effect is quite general. Moreover, whereas the correct general physical definition of time reversal in the presence of memory remains unknown, we here show by means of physically relevant examples that at least for semi-Markov processes of first and second order, waiting-time contributions arising from adopting a naive Markovian definition of time reversal generally must be discarded.

Indexed as

entropy productionmilestoningsemi-Markov processeswaiting-time distribution

Identifiers

PMID38625949
PMCPMC11047069

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.