Evidence map›Paper›PMID 38625509›Full record

ArticlePlant molecular biology2024

Oschib1 gene encoding a GH18 chitinase confers resistance against sheath blight disease of rice caused by Rhizoctonia solani AG1-IA.

Naresh Babu Prathi, Chagamreddy Venkata Durga Rani, Vellaisamy Prakasam, Yeshala Chandra Mohan, Gandikota Mahendranath, G K Sri Vidya, C N Neeraja, Raman Meenakshi Sundaram, Satendra K Mangrauthia

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Article in Plant molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Naresh Babu PrathiInstitute of Biotechnology, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Rajendranagar, Hyderabad, 500030, India.
Chagamreddy Venkata Durga RaniInstitute of Biotechnology, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Rajendranagar, Hyderabad, 500030, India. ranivenkata2@gmail.com.
Vellaisamy PrakasamICAR-Indian Council of Agricultural Research (ICAR)- Indian Institute of Rice Research, Hyderabad, 500030, India.
Yeshala Chandra MohanInstitute of Rice Research, ARI, PJTSAU, Rajendranagar, Hyderabad, 500030, India.
Gandikota MahendranathICAR-Indian Council of Agricultural Research (ICAR)- Indian Institute of Rice Research, Hyderabad, 500030, India.
G K Sri VidyaDepartment of Molecular Biology and Biotechnology, SV Agriculture College, Tirupati, 517502, India.
C N NeerajaICAR-Indian Council of Agricultural Research (ICAR)- Indian Institute of Rice Research, Hyderabad, 500030, India.
Raman Meenakshi SundaramICAR-Indian Council of Agricultural Research (ICAR)- Indian Institute of Rice Research, Hyderabad, 500030, India. R.sundaram@icar.gov.in.
Satendra K MangrauthiaICAR-Indian Council of Agricultural Research (ICAR)- Indian Institute of Rice Research, Hyderabad, 500030, India. Satendra.KM@icar.gov.in.ORCID http://orcid.org/0000-0001-6316-9848
Indian Institute of Rice Research · INProfessor Jayashankar Telangana State Agricultural University · INSri Venkateswara Veterinary University · IN

Funding

DBT BT/PR6466/COE/34/16/2012
6 · The paper itself

Abstract

Sheath blight disease of rice caused by Rhizoctonia solani AG1-IA, is a major fungal disease responsible for huge loss to grain yield and quality. The major limitation of achieving persistent and reliable resistance against R. solani is the governance of disease resistance trait by many genes. Therefore, functional characterization of new genes involved in sheath blight resistance is necessary to understand the mechanism of resistance as well as evolving effective strategies to manage the disease through host-plant resistance. In this study, we performed RNA sequencing of six diverse rice genotypes (TN1, BPT5204, Vandana, N22, Tetep, and Pankaj) from sheath and leaf tissue of control and fungal infected samples. The approach for identification of candidate resistant genes led to identification of 352 differentially expressed genes commonly present in all the six genotypes. 23 genes were analyzed for RT-qPCR expression which helped identification of Oschib1 showing differences in expression level in a time-course manner between susceptible and resistant genotypes. The Oschib1 encoding classIII chitinase was cloned from resistant variety Tetep and over-expressed in susceptible variety Taipei 309. The over-expression lines showed resistance against R. solani, as analyzed by detached leaf and whole plant assays. Interestingly, the resistance response was correlated with the level of transgene expression suggesting that the enzyme functions in a dose dependent manner. We report here the classIIIb chitinase from chromosome10 of rice showing anti-R. solani activity to combat the dreaded sheath blight disease.

Indexed as

ChitinasesOryzaGenotypeRhizoctoniaChitinasesChitinaseOs10g0416500PR proteinRNA-SeqSheath blightTransgenic

Identifiers

PMID38625509
OpenAlexW4394844572

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.