Evidence map›Paper›PMID 38625060›Full record

ArticleThe ISME journal2024

Prevalence of trace gas-oxidizing soil bacteria increases with radial distance from Polloquere hot spring within a high-elevation Andean cold desert.

Zachary K Garvin, Sebastián R Abades, Nicole Trefault, Fernando D Alfaro, Katie Sipes, Karen G Lloyd, Tullis C Onstott

Open access · goldAbstract read
In one paragraph

Article in The ISME journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Zachary K GarvinDepartment of Geosciences, Princeton University, Princeton, NJ 08544, United States.
Sebastián R AbadesGEMA Center for Genomics, Ecology and Environment, Faculty of Interdisciplinary Studies, Universidad Mayor, 8580745, Santiago, Chile.
Nicole TrefaultGEMA Center for Genomics, Ecology and Environment, Faculty of Interdisciplinary Studies, Universidad Mayor, 8580745, Santiago, Chile.
Fernando D AlfaroGEMA Center for Genomics, Ecology and Environment, Faculty of Interdisciplinary Studies, Universidad Mayor, 8580745, Santiago, Chile.
Katie SipesDepartment of Microbiology, University of Tennessee, Knoxville, TN 37996, United States.
Karen G LloydDepartment of Microbiology, University of Tennessee, Knoxville, TN 37996, United States.
Tullis C OnstottDepartment of Geosciences, Princeton University, Princeton, NJ 08544, United States.
Universidad Mayor · CLPrinceton University · USAarhus University · DKUniversity of Tennessee at Knoxville · US

Funding

Astrobiology Early Career Collaboration AwardDivision of Ocean Sciences 2151015Frontier Research in Earth Sciences 2121637High Meadows Environmental Institute at Princeton UniversityNASANational Fund for Scientific and Technological Development 1170995National Science FoundationWalbridge Fund Graduate AwardW.M. Keck Foundation G110-21-W8189
6 · The paper itself

Abstract

High-elevation arid regions harbor microbial communities reliant on metabolic niches and flexibility to survive under biologically stressful conditions, including nutrient limitation that necessitates the utilization of atmospheric trace gases as electron donors. Geothermal springs present "oases" of microbial activity, diversity, and abundance by delivering water and substrates, including reduced gases. However, it is unknown whether these springs exhibit a gradient of effects, increasing their impact on trace gas-oxidizers in the surrounding soils. We assessed whether proximity to Polloquere, a high-altitude geothermal spring in an Andean salt flat, alters the diversity and metabolic structure of nearby soil bacterial populations compared to the surrounding cold desert. Recovered DNA and metagenomic analyses indicate that the spring represents an oasis for microbes in this challenging environment, supporting greater biomass with more diverse metabolic functions in proximal soils that declines sharply with radial distance from the spring. Despite the sharp decrease in biomass, potential rates of atmospheric hydrogen (H2) and carbon monoxide (CO) uptake increase away from the spring. Kinetic estimates suggest this activity is due to high-affinity trace gas consumption, likely as a survival strategy for energy/carbon acquisition. These results demonstrate that Polloquere regulates a gradient of diverse microbial communities and metabolisms, culminating in increased activity of trace gas-oxidizers as the influence of the spring yields to that of the regional salt flat environment. This suggests the spring holds local importance within the context of the broader salt flat and potentially represents a model ecosystem for other geothermal systems in high-altitude desert environments.

Indexed as

BacteriaDesert ClimateHot SpringsOxidation-ReductionSoil MicrobiologyAltitudeCarbon MonoxideHydrogenMicrobiotaSoilCarbon MonoxideHydrogenSoilgeomicrobiologymetagenomicsmicrobial ecologytrace gas

Identifiers

PMID38625060
PMCPMC11094475
OpenAlexW4394854020

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.