Evidence map›Paper›PMID 38625022›Full record

ArticleApplied and environmental microbiology2024

Characterization of

Silja Välimets, Peicheng Sun, Ludovika Jessica Virginia, Gijs van Erven, Mark G Sanders, Mirjam A Kabel, Clemens Peterbauer

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Silja VälimetsLaboratory of Food Biotechnology, Department of Food Science and Technology, University of Natural Resources and Life Sciences, Vienna (BOKU), Muthgasse, Vienna, Austria.ORCID 0009-0007-7081-093X
Peicheng SunLaboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden, Wageningen, the Netherlands.
Ludovika Jessica VirginiaLaboratory of Food Biotechnology, Department of Food Science and Technology, University of Natural Resources and Life Sciences, Vienna (BOKU), Muthgasse, Vienna, Austria.
Gijs van ErvenLaboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden, Wageningen, the Netherlands.
Mark G SandersLaboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden, Wageningen, the Netherlands.
Mirjam A KabelLaboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden, Wageningen, the Netherlands.
Clemens PeterbauerLaboratory of Food Biotechnology, Department of Food Science and Technology, University of Natural Resources and Life Sciences, Vienna (BOKU), Muthgasse, Vienna, Austria.ORCID 0000-0002-8033-198X
Wageningen University & Research · NLBOKU University · AT

Funding

Austrian Science Fund FWF W1224
6 · The paper itself

Abstract

Dye-decolorizing peroxidases are heme peroxidases with a broad range of substrate specificity. Their physiological function is still largely unknown, but a role in the depolymerization of plant cell wall polymers has been widely proposed. Here, a new expression system for bacterial dye-decolorizing peroxidases as well as the activity with previously unexplored plant molecules are reported. The dye-decolorizing peroxidase from IMPORTANCE: Peroxidases require correct incorporation of the heme cofactor for activity. Heterologous overproduction of peroxidases often results in an inactive enzyme due to insufficient heme synthesis by the host organism. Therefore, peroxidases are incubated with excess heme during or after purification to reconstitute activity.

Indexed as

AmycolatopsisColoring AgentsGlucosidesPeroxidasesArbutinBenzyl AlcoholsColorCoumarinsEthersFlavanonesFlavonoidsGlucoseHydrogen PeroxideLigninMass SpectrometryRutinArbutinBenzyl AlcoholsColoring AgentsCoumarinsEthersFlavanonesFlavonoidsfraxinGlucoseGlucosidesgossypinHydrogen PeroxideLigninlignocellulosenaringinPeroxidasesRutinsalicindye-decolorizing peroxidaseO-glycosidesrecombinant expression

Identifiers

PMID38625022
PMCPMC11107159
OpenAlexW4394844597

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.