Evidence map›Paper›PMID 38621119›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Proof-of-concept studies with a computationally designed M

Christina Papini, Irfan Ullah, Amalendu P Ranjan, Shuo Zhang, Qihao Wu, Krasimir A Spasov, Chunhui Zhang, Walther Mothes, Jason M Crawford, Brett D Lindenbach and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. The Mac1 ADP-ribosylhydrolase is a Therapeutic Target for SARS-CoV-2.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
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  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Christina Papini *Department of Pharmacology, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0000-0002-6098-4959
Irfan Ullah *Department of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0000-0002-7760-8693
Amalendu P RanjanDepartment of Microbiology, Immunology and Genetics Graduate School for Biomedical Sciences, University of North Texas Health Science Center, Fort Worth, TX 76107.ORCID 0000-0002-3641-7751
Shuo ZhangDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06520-8066.
Qihao WuDepartment of Chemistry, Yale University, New Haven, CT 06520-8107.ORCID 0000-0002-9677-9017
Krasimir A SpasovDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0009-0005-8232-0239
Chunhui ZhangDepartment of Chemistry, Yale University, New Haven, CT 06520-8107.ORCID 0000-0002-4579-9202
Walther MothesDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0000-0002-3367-7240
Jason M CrawfordDepartment of Chemistry, Yale University, New Haven, CT 06520-8107.ORCID 0000-0002-7583-1242
Brett D LindenbachDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06520-8066.
Pradeep D UchilDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0000-0002-7236-858X
Priti KumarDepartment of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0000-0002-6901-5601
William L JorgensenDepartment of Chemistry, Yale University, New Haven, CT 06520-8107.ORCID 0000-0002-3993-9520
Karen S AndersonDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520-8066.ORCID 0000-0003-3433-0780
Yale University · USUniversity of North Texas · US

Funding

Targeting druggable coronavirus proteinsU19AI171443 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI IAN A WILSON · 2022 to 2026
$101.4M
X-ray Scattering Technology CoreP30GM133893 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI Sean McSweeney · 2019 to 2026
$38.6M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI MALCOLM S. CAPEL · 2018 to 2026
$34.2M
POTENTIAL FUNCTIONS FOR WATER PROTEIN INTERACTIONSR01GM032136 · NIGMS · YALE UNIVERSITY · PI JORGENSEN, WILLIAM L. · 1985 to 2023
$8.2M
Live imaging of SARS-CoV-2 infection in novel humanized miceR24OD026440 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BREHM, MICHAEL ALLEN, EMERSON, CHARLES P. · 2019 to 2022
$4.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
NIAID NIH HHS U19 AI171443NIGMS NIH HHS P30 GM124165NIGMS NIH HHS P30 GM133893NIGMS NIH HHS R01 GM032136NIH HHS R24 OD026440NIH HHS S10 OD021527
6 · The paper itself

Abstract

As the SARS-CoV-2 virus continues to spread and mutate, it remains important to focus not only on preventing spread through vaccination but also on treating infection with direct-acting antivirals (DAA). The approval of Paxlovid, a SARS-CoV-2 main protease (M

Indexed as

Antiviral AgentsHepatitis C, ChronicHydroxylaminesLactamsLeucineNitrilesProlineRitonavirAnimalsClinical ProtocolsCytidineDrug CombinationsHumansMiceAntiviral AgentsCytidineDrug CombinationsHydroxylaminesLactamsLeucinemolnupiravirnirmatrelvir and ritonavir drug combinationNitrilesProlineRitonavirdrug synergymolnupiravirMpro61protease inhibitorSARS-CoV-2

Identifiers

PMID38621119
PMCPMC11046628
OpenAlexW4394804001

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.