Evidence map›Paper›PMID 38620009›Full record

ArticleG3 (Bethesda, Md.)2024

A high-quality genome of the convergent lady beetle, Hippodamia convergens.

Gavrila Ang, Andrew Zhang, John Obrycki, Arun Sethuraman

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Gavrila AngDepartment of Biology, San Diego State University, San Diego, CA 92182, USA.
Andrew ZhangDepartment of Biology, Indiana University, Bloomington, IN 47408, USA.ORCID 0000-0001-5594-4664
John ObryckiDepartment of Entomology, University of Kentucky, Lexington, KY 40506, USA.
Arun SethuramanDepartment of Biology, San Diego State University, San Diego, CA 92182, USA.ORCID 0000-0002-8201-8292

Funding

NSF REU: 1852189USDA HSI:2022-77040-38529
6 · The paper itself

Abstract

Here, we describe a high-quality genome assembly and annotation of the convergent lady beetle, Hippodamia convergens (Coleoptera: Coccinellidae). The highest quality unmasked genome comprises 619 megabases (Mb) of chromosomal DNA, organized into 899 contigs, with a contig N50 score of 89 Mbps. The genome was assessed to be 96% complete (BUSCO). Reconstruction of a whole-genome phylogeny resolved H. convergens as sister to the Harlequin lady beetle, Harmonia axyridis, and nested within a clade of several known agricultural pests.

Indexed as

ColeopteraGenome, InsectMolecular Sequence AnnotationPhylogenyAnimalsGenomicsannotationassemblybioinformaticsgenomicslady beetlesphylogenomics

Identifiers

PMID38620009
PMCPMC11232282

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.