Evidence map›Paper›PMID 38617584›Full record

ArticlePNAS nexus2024

Host-microbiome associations in saliva predict COVID-19 severity.

Hend Alqedari, Khaled Altabtbaei, Josh L Espinoza, Saadoun Bin-Hasan, Mohammad Alghounaim, Abdullah Alawady, Abdullah Altabtabae, Sarah AlJamaan, Sriraman Devarajan, Tahreer AlShammari and 5 more

Open access · goldAbstract read
In one paragraph

Article in PNAS nexus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
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  8. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Hend AlqedariDepartment of Public Health and Community Service, Tufts University School of Dental Medicine, 1 Kneeland Street, Boston, MA 02111, USA.ORCID https://orcid.org/0000-0003-3422-5091
Khaled AltabtbaeiFaculty of Medicine and Dentistry, School of Dentistry, University of Alberta, Edmonton, AB T6G 2L7, Canada.ORCID https://orcid.org/0000-0001-7890-5254
Josh L EspinozaDepartment of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA.ORCID https://orcid.org/0000-0003-3447-3845
Saadoun Bin-HasanDepartment of Pediatrics, Farwaniyah Hospital, Ministry of Health, 7XF4+WPJ Al Farwaniyah, Kuwait.ORCID https://orcid.org/0000-0003-2791-5836
Mohammad AlghounaimDepartment of Pediatrics, Amiri Hospital, Ministry of Health, 9XQQ+42 Kuwait City, Kuwait.
Abdullah AlawadyDepartment of Pediatrics, Farwaniyah Hospital, Ministry of Health, 7XF4+WPJ Al Farwaniyah, Kuwait.
Abdullah AltabtabaeDepartment of Pediatrics, Farwaniyah Hospital, Ministry of Health, 7XF4+WPJ Al Farwaniyah, Kuwait.
Sarah AlJamaanDepartment of Pediatrics, Farwaniyah Hospital, Ministry of Health, 7XF4+WPJ Al Farwaniyah, Kuwait.
Sriraman DevarajanDasman Diabetes Institute, 1180 Dasman, 9XQV+V9 Kuwait City, Kuwait.
Tahreer AlShammariDasman Diabetes Institute, 1180 Dasman, 9XQV+V9 Kuwait City, Kuwait.
Mohammed Ben EidDepartment of Pediatrics, Farwaniyah Hospital, Ministry of Health, 7XF4+WPJ Al Farwaniyah, Kuwait.ORCID https://orcid.org/0009-0009-7776-0845
Michele MatsuokaDepartment of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA.
Hyesun JangDepartment of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA.
Christopher L DupontDepartment of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA.ORCID https://orcid.org/0000-0002-0896-6542
Marcelo FreireDepartment of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA.ORCID https://orcid.org/0000-0003-4906-7698
Farwaniya Hospital · KWJ. Craig Venter Institute · USDasman Diabetes Institute · KWAmiri Hospital · KWTufts University · USUniversity of Alberta · CA

Funding

Identifying Influenza Virus Infection Severity and Outcome Signatures Through Artificial Intelligence-driven AnalysesR01AI170111 · NIAID · J. CRAIG VENTER INSTITUTE, INC. · PI Christopher L. Dupont · 2022 to 2026
$3.0M
Exploring the Ecological Role of Rothia mucilaginosa and It's Iron Binding Siderophore EnterobactinR21DE029625 · NIDCR · J. CRAIG VENTER INSTITUTE, INC. · PI FREIRE, MARCELO · 2021 to 2022
$536k
NIAID NIH HHS R01 AI170111NIDCR NIH HHS R21 DE029625
6 · The paper itself

Abstract

Established evidence indicates that oral microbiota plays a crucial role in modulating host immune responses to viral infection. Following severe acute respiratory syndrome coronavirus 2, there are coordinated microbiome and inflammatory responses within the mucosal and systemic compartments that are unknown. The specific roles the oral microbiota and inflammatory cytokines play in the pathogenesis of coronavirus disease 2019 (COVID-19) are yet to be explored. Here, we evaluated the relationships between the salivary microbiome and host parameters in different groups of COVID-19 severity based on their oxygen requirement. Saliva and blood samples (

Indexed as

COVID-19host-microbialinflammatory cytokinesmachine learningsaliva microbiome

Identifiers

PMID38617584
PMCPMC11010653
OpenAlexW4393164267

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.